Gene Psyc_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0281 
Symbol 
ID3514175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp340828 
End bp341910 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content48% 
IMG OID637668968 
Productbeta-hexosaminidase 
Protein accessionYP_263585 
Protein GI71064858 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.929457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGGTG TTTTAATGAT TGATATCGAT AGTACCGCGC TGACGGCTGA AGATGTCAGC 
CTAATTAGAC AAGCACAAGT TGGTGGGGTC ATTTTGTTCG CCAGAAACGT TACAGATGCC
GCCCAAGTGC GCGCGCTGTG TGACGACATA CGTTGTCACA ATGCCGATAT CCTGATTGGG
GTCGATCAAG AAGGGGGGCG CGTTGCCAGA TTACGTAACG GTTTTACGCC ATTGCCAGCG
ATGGGCAGGC TTGGTGAGTT ATTTAACCAA GACCCCAATC GCGCCCTCGA ATGTGCTTAT
GATTGTGGCT ATTTGATGGC GGCGGAAGTA TTGGCAGTAG GCATAGATTT GAGCTTTGCA
CCGGTGCTCG ATAGAGATGG TATTAGCCAA GTTATTGGCG ATCGCAGCTT TCACCATGAT
CCTCAAGCCA TCATCGCTCT GGCAAGCCAG TTTATGCGAG GCATGAAAGC TGCTGGCATG
GCAACAACAG GCAAGCATTT CCCTGGTCAC GGTTCGATAG CTCCCGACTC GCACGTCGCT
GAAGCCATTG ATGACCGTAG CTTAGATGAT ATTATGAACA GTGATATGCA ACCATTTGCG
CAAACGTTGC CATGGCTCGA CGCTTTGATG CCAGCGCATG TGATTTTTTC ACAAGTAGAT
AATAAACCAG CGGGATTTTC TAAAATTTGG CTCAAAGACA TCATTCGTGA ACAGCTAAAT
TTTGAGGGTG TGTTATTTTC TGATGACTTG TCTATGGCAG GGGCAAAAGC GGCGGGTGAT
GTCAGTGCAC GCGTCACAGC AGCGATTGAA GCCGGTTGCG ATATTGCTTT GGTCTGTAAC
GACCGCGTCG CCGCTCATGA GGCGGCAAAA GCGGCGCAAG CGCTGCCCTA TCCCAATCAA
AAACGCATCA AGACCATGTG TGGGCAGATA CCGGCTTGGC AAGGCGATCT CGAATCTACT
TGTCAGCAGT TTGACTATTG GCAACAGGCA AAAATAAATA TCTCACAGAC GTTCTTTCCT
ACTCAATTAG AATCTCAAGC ATCAGCTAAC CTTGAGCTAA AAGACCCAAC CAGTTATATA
TAA
 
Protein sequence
MYGVLMIDID STALTAEDVS LIRQAQVGGV ILFARNVTDA AQVRALCDDI RCHNADILIG 
VDQEGGRVAR LRNGFTPLPA MGRLGELFNQ DPNRALECAY DCGYLMAAEV LAVGIDLSFA
PVLDRDGISQ VIGDRSFHHD PQAIIALASQ FMRGMKAAGM ATTGKHFPGH GSIAPDSHVA
EAIDDRSLDD IMNSDMQPFA QTLPWLDALM PAHVIFSQVD NKPAGFSKIW LKDIIREQLN
FEGVLFSDDL SMAGAKAAGD VSARVTAAIE AGCDIALVCN DRVAAHEAAK AAQALPYPNQ
KRIKTMCGQI PAWQGDLEST CQQFDYWQQA KINISQTFFP TQLESQASAN LELKDPTSYI