Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0281 |
Symbol | |
ID | 3514175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 340828 |
End bp | 341910 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637668968 |
Product | beta-hexosaminidase |
Protein accession | YP_263585 |
Protein GI | 71064858 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.929457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATGGTG TTTTAATGAT TGATATCGAT AGTACCGCGC TGACGGCTGA AGATGTCAGC CTAATTAGAC AAGCACAAGT TGGTGGGGTC ATTTTGTTCG CCAGAAACGT TACAGATGCC GCCCAAGTGC GCGCGCTGTG TGACGACATA CGTTGTCACA ATGCCGATAT CCTGATTGGG GTCGATCAAG AAGGGGGGCG CGTTGCCAGA TTACGTAACG GTTTTACGCC ATTGCCAGCG ATGGGCAGGC TTGGTGAGTT ATTTAACCAA GACCCCAATC GCGCCCTCGA ATGTGCTTAT GATTGTGGCT ATTTGATGGC GGCGGAAGTA TTGGCAGTAG GCATAGATTT GAGCTTTGCA CCGGTGCTCG ATAGAGATGG TATTAGCCAA GTTATTGGCG ATCGCAGCTT TCACCATGAT CCTCAAGCCA TCATCGCTCT GGCAAGCCAG TTTATGCGAG GCATGAAAGC TGCTGGCATG GCAACAACAG GCAAGCATTT CCCTGGTCAC GGTTCGATAG CTCCCGACTC GCACGTCGCT GAAGCCATTG ATGACCGTAG CTTAGATGAT ATTATGAACA GTGATATGCA ACCATTTGCG CAAACGTTGC CATGGCTCGA CGCTTTGATG CCAGCGCATG TGATTTTTTC ACAAGTAGAT AATAAACCAG CGGGATTTTC TAAAATTTGG CTCAAAGACA TCATTCGTGA ACAGCTAAAT TTTGAGGGTG TGTTATTTTC TGATGACTTG TCTATGGCAG GGGCAAAAGC GGCGGGTGAT GTCAGTGCAC GCGTCACAGC AGCGATTGAA GCCGGTTGCG ATATTGCTTT GGTCTGTAAC GACCGCGTCG CCGCTCATGA GGCGGCAAAA GCGGCGCAAG CGCTGCCCTA TCCCAATCAA AAACGCATCA AGACCATGTG TGGGCAGATA CCGGCTTGGC AAGGCGATCT CGAATCTACT TGTCAGCAGT TTGACTATTG GCAACAGGCA AAAATAAATA TCTCACAGAC GTTCTTTCCT ACTCAATTAG AATCTCAAGC ATCAGCTAAC CTTGAGCTAA AAGACCCAAC CAGTTATATA TAA
|
Protein sequence | MYGVLMIDID STALTAEDVS LIRQAQVGGV ILFARNVTDA AQVRALCDDI RCHNADILIG VDQEGGRVAR LRNGFTPLPA MGRLGELFNQ DPNRALECAY DCGYLMAAEV LAVGIDLSFA PVLDRDGISQ VIGDRSFHHD PQAIIALASQ FMRGMKAAGM ATTGKHFPGH GSIAPDSHVA EAIDDRSLDD IMNSDMQPFA QTLPWLDALM PAHVIFSQVD NKPAGFSKIW LKDIIREQLN FEGVLFSDDL SMAGAKAAGD VSARVTAAIE AGCDIALVCN DRVAAHEAAK AAQALPYPNQ KRIKTMCGQI PAWQGDLEST CQQFDYWQQA KINISQTFFP TQLESQASAN LELKDPTSYI
|
| |