Gene Psyc_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0170 
Symbolpth 
ID3515132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp196856 
End bp197437 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content46% 
IMG OID637668855 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_263477 
Protein GI71064750 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00869457 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCATAA AGCTTATTGT CGGTCTTGGT AATCCGGGTC AGGAGTATAT GTTTACGCGC 
CATAATGCAG GATTTTGGTT CGTCCATCAT TTGGCTCAGC AGTTTAATAT CGCCCTCGCC
CCCGACAAAA AATTCCACGG TGTCACAGGA CGCGGGCAAA TTCATGGCTC TGATGTGCGT
CTGTTGATGC CGCTGACCTT TATGAATAAG TCAGGTCAGT CGGTTGTGCC CATGGTTAAA
TTTTATGGCA TTGACAATGA CGAGCTGTTA ATCGCTCATG ATGAGCTTGA TATTCCCGCT
GGCAGCATCA AACTCAAAAC CGATGGTGGT CATGGCGGTC ATAATGGTCT GCGTGACATC
ACCCCGCATA TTGGCAACGA CTTCCATCGT CTGCGTGTGG GCATTGGTCA TCCGGGTCAC
AAATCTAAAG TCAGTGGACA TGTTCTCTCA AAAGCTGCGC CAGATGAGCA AATTGCCATT
GATAGTGCAT TATCTGCCGC TTTTGAAGCC TTACCATTAT TATTAGATGG TGATATTGAA
AAGGCACGTT CGCAAATTAA TGGCTTTAAA TTACCTGAAT AA
 
Protein sequence
MAIKLIVGLG NPGQEYMFTR HNAGFWFVHH LAQQFNIALA PDKKFHGVTG RGQIHGSDVR 
LLMPLTFMNK SGQSVVPMVK FYGIDNDELL IAHDELDIPA GSIKLKTDGG HGGHNGLRDI
TPHIGNDFHR LRVGIGHPGH KSKVSGHVLS KAAPDEQIAI DSALSAAFEA LPLLLDGDIE
KARSQINGFK LPE