Gene Psyc_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0169 
SymbolpanD 
ID3515131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp196376 
End bp196756 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content45% 
IMG OID637668854 
Productaspartate alpha-decarboxylase 
Protein accessionYP_263476 
Protein GI71064749 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00266138 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTACTTA ATATGCTCAA GTGCAAATTA CATCGCGCCC GTGTTACTCA TGCTGAGCTA 
CACTACGAAG GCTCATGCGG TATTGATGGT GATTTATTAG ATCTTGCCGG TCTGCGTGAA
AACGAATCTA TCGACATCTA TAATGTCACC AATGGCAAAC GCTTTCGCAC CTACGCTATC
CGCGCTGAAG CTGGCTCTGG TATTATCTCA CTAAACGGTG CAGCGGCTCA TATGGCTGAT
TTAGGTGATA TCGTTATCAT CTGTGCTTAC GCGCATTTTG ACGAAGTCGA AGCTTCAACA
TATCAGCCAA GACTGGTCTA TTGCAACGAA GACAATACGG TTAAAGACAC AGCGAATATT
ATCCCTGTGC AAGTAGCTTA A
 
Protein sequence
MLLNMLKCKL HRARVTHAEL HYEGSCGIDG DLLDLAGLRE NESIDIYNVT NGKRFRTYAI 
RAEAGSGIIS LNGAAAHMAD LGDIVIICAY AHFDEVEAST YQPRLVYCNE DNTVKDTANI
IPVQVA