Gene PsycPRwf_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2406 
Symbol 
ID5204472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009517 
Strand- 
Start bp529 
End bp1662 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content41% 
IMG OID640593634 
Producthypothetical protein 
Protein accessionYP_001274383 
Protein GI148641540 
COG category[L] Replication, recombination and repair 
COG ID[COG5655] Plasmid rolling circle replication initiator protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCCAA ATCACGCAAC CACTGTCAAC GAAAATATTA AAAAGCATAA CAAAAACGTT 
GATAAAAATA TCCCTTCAGC AGAATTAATT GATTTTCTCT ACGATAACGA CTTACCCGAA 
AGCGTAGACG TTTCTTTAGC GTCCGTATCC GCCCGTGATA GCGTTTGGGA TAAGCATAGG 
CTAGATACAC TCATTATTCA GGAAATGTAC GCCATAGAGT GCGAATTTGA GCGTTATAGC 
GAACGTATGA CGGATTGTAG TGGTTGGCTC AAGTTTGGAT TTAACGAAGT TAACGGTTTA 
GTTTTGAAAC AAGCCTTTTT TTGCCGTGTT CGTTACTGCG GTATGTGCCA ATGGCGTAGG 
TCATTACTCT GGAAAGCCTT GATGTATAAA ACATACGATG AAATTATGCA GACACACCCG 
ACACATCGCT TTGTGTTTTT AACCCTGACG CTTAAAAATC CGCCTATCGG TGACTTGCGC 
GAAACCTTGC AGCACATGAA TAAATCATGG CAACGCTTAA AAGATCGTAA AGAATTTATA 
GCAGGCGTTG AAGGTTGGGT ACGCACAACG GAAGTCACAC GTCCCAAGCA GAAACGTAAG 
ACTAAAAAAG ACCCGATTGT CTATTGCCCC AAGACCAAAA ACACCCACGC ACACCCACAT 
TTTCACGTTA TTTTGATGGT TAAACCATCT TACTTTTCTG GTAAAAACTA TATCAAACGT 
CAACGATGGC AAGAGCTTTG GGCTGATTGT CTGCGTGTTG ATTACATGCC ACAAGTCGAT 
ATTAGAACCG TTAAGCCAAG AAAAAAAGGC GCTGGTGATG ATGACGGTAT GCGTGGGGCG 
ATTGCTGAAA CCTTGAAATA TGCTGTTAAA CCTGATGACA TCATGCATGA TAACGAAGAC 
CCTAAAGCCC GTGAATGGTT TTATGAGTTG ACCAGACAGA CCCATAAATT ACGGTTTGTT 
GCTACTGGTG GACTGCTCAA AAATGCTTTG AAACCTGATG ATGATATTAC TAACGAGGAT 
ATGATCGACA CTGGCAACGA TGACGAAATA ACCGAAACTG ATGACCGTAG ATTAAATTTT 
TCGTTTTATA AATCAAAGGG CGGGTATCTG TATAACCCAA TCCATAACGA GTAG
 
Protein sequence
MFPNHATTVN ENIKKHNKNV DKNIPSAELI DFLYDNDLPE SVDVSLASVS ARDSVWDKHR 
LDTLIIQEMY AIECEFERYS ERMTDCSGWL KFGFNEVNGL VLKQAFFCRV RYCGMCQWRR 
SLLWKALMYK TYDEIMQTHP THRFVFLTLT LKNPPIGDLR ETLQHMNKSW QRLKDRKEFI 
AGVEGWVRTT EVTRPKQKRK TKKDPIVYCP KTKNTHAHPH FHVILMVKPS YFSGKNYIKR 
QRWQELWADC LRVDYMPQVD IRTVKPRKKG AGDDDGMRGA IAETLKYAVK PDDIMHDNED 
PKAREWFYEL TRQTHKLRFV ATGGLLKNAL KPDDDITNED MIDTGNDDEI TETDDRRLNF 
SFYKSKGGYL YNPIHNE