| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2385 |
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| Symbol | |
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| ID | 5205109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2972601 |
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| End bp | 2973707 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640600648 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001281275 |
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| Protein GI | 148654182 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.811979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00228215 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGCTGAAA ATAAGCCGCA AACTAGGGTT GAAAATGCGG CCAATCATGC CTTAGAAATA
GGCTCAAATA CACCCCCAAA AAAGCAAGAT ATTTACTACA TGAATTTGGC CATTGAAGAG
GCCAAAAAAG GGCTGTTTAC TACTAGGCCA AACCCTGCTG TAGGCTGTGT TATTGTGAAT
AATAACTTAA TAGTAGGCAC GGGTTATCAC CCTCAGGCAG GGCAGCCACA TGCTGAAGTT
TTTGCCTTAA GAGAAGCGAA AGATAATGCA AAAGGTGCCA CTGCCTATGT CACTTTAGAG
CCTTGTAGCC ATACCGGAAG AACCCCACCT TGTGCCCAAG CTTTGATCAA CTCAGGGGTA
TCTCGAGTAG TGGTGGCGGG GCTAGACCCC AATCCAAAGG TGGCTGGTCG CGGTATAGCC
ATGTTAAAAG CGGCGGGTAT TGAGGTGACA GTAGGCGTAT CTACCCAGCA AGCAGAGCAG
TTGAATCTAG GCTTTTTAAA GGCCATGCGT ACTCAAATGC CTTATGTGCG CCTAAAGATA
GCCAGTAGCT TAGATGGCCG TACAGCCATG GCATCGGGCG AGTCTAAGTG GATTACAGGC
CCTGCAGCAC GTGAGGATGT ACAGAAGCTG CGGGCGCTCA GTGGTGCCAT TATTACCGGA
AGCCAGACCA TTATTGATGA CAATCCCAGT CTAAATGTGC GCTCAAGTCA ATTGGGGGTG
GCCTTAGATA AGGTGCCACA GCCTAAGATT GTGGTATTAG ATAGAAGACA GCGGCTTGAT
CAGGCGCATT ATAAAGTGTT TGAGAGCCCA GACACTCTAC TTTGGGCTGA GCATGATTTA
ACTGCCTTAC TTCATCAGTT AGTGACTCAA TATCAAGTAC AAGATGTGCT TGTCGAAGCG
GGATCACAGG TATCAGGCAG CTTCATTGAA GCGGGATTAG TGGATGAGCT TATTGTGTAT
CAGGCCCCGT GTTTATTGGG ACACAGCGCA AAACCTATGT TGAACTTAAC TGTGGATAAC
TTATTTTTGC AGCACAGGTT TGAGCGAGTC AGCGTGTCTG AAGTAGGTTC AGATTTGAAG
CTGGTATATA AGCCTGTATG CCAATAA
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| Protein sequence | MAENKPQTRV ENAANHALEI GSNTPPKKQD IYYMNLAIEE AKKGLFTTRP NPAVGCVIVN
NNLIVGTGYH PQAGQPHAEV FALREAKDNA KGATAYVTLE PCSHTGRTPP CAQALINSGV
SRVVVAGLDP NPKVAGRGIA MLKAAGIEVT VGVSTQQAEQ LNLGFLKAMR TQMPYVRLKI
ASSLDGRTAM ASGESKWITG PAAREDVQKL RALSGAIITG SQTIIDDNPS LNVRSSQLGV
ALDKVPQPKI VVLDRRQRLD QAHYKVFESP DTLLWAEHDL TALLHQLVTQ YQVQDVLVEA
GSQVSGSFIE AGLVDELIVY QAPCLLGHSA KPMLNLTVDN LFLQHRFERV SVSEVGSDLK
LVYKPVCQ
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