Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2303 |
Symbol | |
ID | 5206124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2870361 |
End bp | 2871074 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640600566 |
Product | pirin domain-containing protein |
Protein accession | YP_001281193 |
Protein GI | 148654100 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000285966 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0109374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCG TCCATCACCC AGCCACAAGT CGTGGCGGCT CTCACCACGG TTGGCTTAAA AGTAAGCATA CCTTTAGCTT TGCTGACTAC TATGATCCCA AGCGCGTAGG CTTTGGTGCC TTGCGTGTGA TCAATGATGA CCATGTTGAA GGAGGGATGG GCTTTGGCGA TCACTCCCAT GCCAATATGG AAATCATTAG CATTCCGCTG TCTGGCAGAC TTCGTCATGG TGACAGTATG GGCAACTATG GCACCATTCG TAGTGGTGAA ATTCAGGTAA TGTCGGCCGG TACTGGCGTG GTCCATTCTG AGATGAACGA TGATGACGAA AATCCAGTCA AATTCTTGCA AATTTGGGTA GTGCCCAATA AGATGGATGT GGCACCACGC TATCAACAAG TAAACTTGGT AGAACTGCTC CAGCGCAATA AATTCAACCA AGTGCTCTCC CCTAATCCAG AAGATGCTGG CGTATGGATC CATCAAAACG CTTGGTTTAG TATCGGTGAG TTTGACAAAG GTGTGACCAC AACTTATAGC TTACGCAGTA CTCTTAATGG TGCTTATGTG TTTGTTATCT CAGGCAAAGT GGTGATTAAT GGTAATACCC TAGAGCCTCG TGATGGGCTT GGTATCACCG ATACCAAAAA CTTCACAATG GATGTGATTG AGGATGCTCA AATTCTTGTC ATAGATGTCC CAATGAGCTT CTAA
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Protein sequence | MKTVHHPATS RGGSHHGWLK SKHTFSFADY YDPKRVGFGA LRVINDDHVE GGMGFGDHSH ANMEIISIPL SGRLRHGDSM GNYGTIRSGE IQVMSAGTGV VHSEMNDDDE NPVKFLQIWV VPNKMDVAPR YQQVNLVELL QRNKFNQVLS PNPEDAGVWI HQNAWFSIGE FDKGVTTTYS LRSTLNGAYV FVISGKVVIN GNTLEPRDGL GITDTKNFTM DVIEDAQILV IDVPMSF
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