Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2300 |
Symbol | |
ID | 5205996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2867366 |
End bp | 2868133 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640600563 |
Product | hypothetical protein |
Protein accession | YP_001281190 |
Protein GI | 148654097 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000548729 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00456123 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTAATC AAAATATTGA CGATAGAAAA GACGAAAGCA ATAAGATTGA AAAACCCAAG TCAACAGGCG GTGGTTTTTG GAAGCGCTTT GAGGCGGCAA TCTTATTAAC CTTAGTGGGC GGCGCAATTG ATACCATTGG TTTTATCGCC TTACTTGGCT TCTTTACCAA CCACGTCACA GGAAACTTAG TGATGGCTGG TGGTGGACTG GTCAAAGGTG GCGATGATCT TTGGATTAAA CTTGGGGCCT TACCGGTATT TATCATTACC GTCATGTTCA CTCAGCGCTA TATCACCAGA AGATCGGCTG ATAAGCCTAT TTTAAGCGAA CTTTTATTTG CAGAAGTGTT GTTTTTAACG GCCTTTATGG TTTCAGCACT GATGTTCGGC CCTTTCGAAG ACCCAGGTGC TATTGACTTA GCCATTACTG GTTTCTTAGG TCTGATGGCC TTCGCTATTC GTAACACAGC GGGTAAGACG GTCATGGGTA AAGTACGTCC GACACTACTG ATGACGGGTA ATACCACACA GTTGGGTATC GATTTATCAG ATTATTTCTT TAACCGTAAT CGCTGCAACA TGGAAAGCTT AAAGCACAGT GCGGCTATTG TTTTCTTCTT TGCCTTTGGT GCATTAATTG GTACTTTGCT CTATATGAAG ATTGGTTTTT GGTCGATTGC GCCATTTATC CTGCCTGTGT TTTATTTGGC CTTTAAATCT CTTGACGAGC AATATCTGGT ACAACAAAAC ATGTCAGCTA AGTCTTGA
|
Protein sequence | MSNQNIDDRK DESNKIEKPK STGGGFWKRF EAAILLTLVG GAIDTIGFIA LLGFFTNHVT GNLVMAGGGL VKGGDDLWIK LGALPVFIIT VMFTQRYITR RSADKPILSE LLFAEVLFLT AFMVSALMFG PFEDPGAIDL AITGFLGLMA FAIRNTAGKT VMGKVRPTLL MTGNTTQLGI DLSDYFFNRN RCNMESLKHS AAIVFFFAFG ALIGTLLYMK IGFWSIAPFI LPVFYLAFKS LDEQYLVQQN MSAKS
|
| |