Gene PsycPRwf_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2300 
Symbol 
ID5205996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2867366 
End bp2868133 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content42% 
IMG OID640600563 
Producthypothetical protein 
Protein accessionYP_001281190 
Protein GI148654097 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000548729 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00456123 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAATC AAAATATTGA CGATAGAAAA GACGAAAGCA ATAAGATTGA AAAACCCAAG 
TCAACAGGCG GTGGTTTTTG GAAGCGCTTT GAGGCGGCAA TCTTATTAAC CTTAGTGGGC
GGCGCAATTG ATACCATTGG TTTTATCGCC TTACTTGGCT TCTTTACCAA CCACGTCACA
GGAAACTTAG TGATGGCTGG TGGTGGACTG GTCAAAGGTG GCGATGATCT TTGGATTAAA
CTTGGGGCCT TACCGGTATT TATCATTACC GTCATGTTCA CTCAGCGCTA TATCACCAGA
AGATCGGCTG ATAAGCCTAT TTTAAGCGAA CTTTTATTTG CAGAAGTGTT GTTTTTAACG
GCCTTTATGG TTTCAGCACT GATGTTCGGC CCTTTCGAAG ACCCAGGTGC TATTGACTTA
GCCATTACTG GTTTCTTAGG TCTGATGGCC TTCGCTATTC GTAACACAGC GGGTAAGACG
GTCATGGGTA AAGTACGTCC GACACTACTG ATGACGGGTA ATACCACACA GTTGGGTATC
GATTTATCAG ATTATTTCTT TAACCGTAAT CGCTGCAACA TGGAAAGCTT AAAGCACAGT
GCGGCTATTG TTTTCTTCTT TGCCTTTGGT GCATTAATTG GTACTTTGCT CTATATGAAG
ATTGGTTTTT GGTCGATTGC GCCATTTATC CTGCCTGTGT TTTATTTGGC CTTTAAATCT
CTTGACGAGC AATATCTGGT ACAACAAAAC ATGTCAGCTA AGTCTTGA
 
Protein sequence
MSNQNIDDRK DESNKIEKPK STGGGFWKRF EAAILLTLVG GAIDTIGFIA LLGFFTNHVT 
GNLVMAGGGL VKGGDDLWIK LGALPVFIIT VMFTQRYITR RSADKPILSE LLFAEVLFLT
AFMVSALMFG PFEDPGAIDL AITGFLGLMA FAIRNTAGKT VMGKVRPTLL MTGNTTQLGI
DLSDYFFNRN RCNMESLKHS AAIVFFFAFG ALIGTLLYMK IGFWSIAPFI LPVFYLAFKS
LDEQYLVQQN MSAKS