Gene PsycPRwf_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2254 
Symbol 
ID5204975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2799664 
End bp2800329 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID640600501 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001281144 
Protein GI148654051 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACA CTGACACTTC AAAAAACACA GCAGTGGCTA AATTCAAGCG ACTGACGCAT 
AAAGACCTAG GAGATAAGGT ACCTAGGCGT GGCGGAAGCG TTGCACCACC TATTGCCCGT
GCTCTGTTTA AACTTATGGG TTGGCGGGCA GTCGGTGAGA TTCCTAATGT ACCAAAGGCG
GTCTTTTTGG CTTTACCGCA CACCTCAAAT TTTGATGGAC TATACGCCAT ACCTTTGGTG
TTGGGGTTAG ACTTAGACAT TAATATCATG GGAAAAGACA GTTTATTTAA GTATCCAGTA
TTGGCGAGCT TCTTTAAATG GGCTGGTATT ATTCCTATTG ATCGCAGCAA AAAGGGTACG
GTGCTACAGG CCAGTATCCA TAAGTTAAAA TCCAGTAAAT CGATGTACTT AGGATTATCA
CCTGAAGGTA CTCGAGACTA TACCGATAGC TGGAAAACTG GGTTTTATTA TATTGCCGAT
GGTGCTCAGG TTCCTATCGT GCCAGTCGCT ATGGACTATA AGAGTAAAGA GGTTCGCTTC
TTAACGCCGG TCTATACCAC GGGTGATTAT GAAAAAGATG TGCTCAAAAT CGTAGAGCAA
TACAAAGGAG TAGTGCCCAA ACACCCTGAG AAGATGTCAA AACCCCTGCA GGATATTAAC
AAATAG
 
Protein sequence
MSNTDTSKNT AVAKFKRLTH KDLGDKVPRR GGSVAPPIAR ALFKLMGWRA VGEIPNVPKA 
VFLALPHTSN FDGLYAIPLV LGLDLDINIM GKDSLFKYPV LASFFKWAGI IPIDRSKKGT
VLQASIHKLK SSKSMYLGLS PEGTRDYTDS WKTGFYYIAD GAQVPIVPVA MDYKSKEVRF
LTPVYTTGDY EKDVLKIVEQ YKGVVPKHPE KMSKPLQDIN K