| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2249 |
|---|
| Symbol | |
|---|
| ID | 5204925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2793397 |
|---|
| End bp | 2793969 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640600496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001281139 |
|---|
| Protein GI | 148654046 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000367355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT ATGCATCAAC TTCCTCTAAA TTGGTCACAA AGCTTGCCGG CAGTATGGCC
ATTGGCTCAA TGCTATTGGC AGGTAGCGTA AGCGCTCAAG CTATGTTACC CACACCTGAG
CCTGAAATGA GCAGCCCAAG CAATCAAGCC AATGCCGCCG CCATGCAAGC TACCCAGGCC
AATCAAGTTG TGTCTAAGAC TGTGGCCGCC TTAGTTAGTG TGGATGCTCA AGGTCAGCCT
ACTTTGAAGC CTATTGATGC CAATACTCGC CTACAAAAAG GCAATGTGAT TGAGTACCAC
AGCTATTTTA CCAACACCGG TAAAGACCGT ATGCGTAAAA TGGATGTGAC CATGACTATT
CCAGAAGAGG TGAAGCTGGT CGGTCAAGTA TCACCCGATA CAGCCTCTGC CAGTATCGAT
GGCACCAACT TTAGTCATAT GCCACTGCGT GGTAGTATTA ATGGCCAAAT GCAAGATGTG
CCACTTGAGT ACTATAAGAA CTTACGCTGG ACCATAGAAG GCTTGGGTAT TAATGAAACT
GCGGTGGTTA AATATCGCGC CATCGTAAAA TAA
|
|---|
| Protein sequence | MKFYASTSSK LVTKLAGSMA IGSMLLAGSV SAQAMLPTPE PEMSSPSNQA NAAAMQATQA
NQVVSKTVAA LVSVDAQGQP TLKPIDANTR LQKGNVIEYH SYFTNTGKDR MRKMDVTMTI
PEEVKLVGQV SPDTASASID GTNFSHMPLR GSINGQMQDV PLEYYKNLRW TIEGLGINET
AVVKYRAIVK
|
|---|
| |