Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2192 |
Symbol | |
ID | 5205931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2727998 |
End bp | 2729764 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640600439 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001281082 |
Protein GI | 148653989 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.899371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAG CTTCAAACTC TACCCAGAAC ACTCAGCTAA GTGATCTTCA CGGAACCTAT CCTACTTATC CTGATATCCC CAGTGACCGT CCTTGGTTTG AATCTTATGA GCGCTATGGC ATTACTTCAC AAATCGAACG CCCCGCCGAT GACACCTCTT TATTAGAAGT ATTTGAACGT AACTTCGCCC GTTTTGGTAA TCGCGATGCT TATATCTGTA TGGGTGGCTC GATCACGTAT CGTGAGCTGG ATACCAAAAG CCGTCAGATA GCCGCTTATC TGCAGTCACT GGGTCTAAAG GTGGGCGATA AAGTGGCAGC AATGATGCCC AACGTATTGC AGTATCCTGT GGTAGCTTTA GGCGTATTGC GTGCAGGTAT GATCTTGGTC AATGTGAACC CACTGTATAC CAGTCATGAG CTTGAACATC AAATCAATGA CAGTGGTGCT AAAGCGATTT TTATCGTAGA AAGCTTTGCC AAGACCTTTG AAGATGTAAC AGACAAAGGC AGTGTAGAGC ATGTGGTGAT CTGTAGTATG GGTGACATGT TGGGGCTGGT AAAAGGCTTT GTGGTCAACA TGGTCGTTCG CCATATCAAA AAAATGGTAC CCAGTTATTC ATTGCCCGGT AGTGTGTCTT ATAAGCACGC CTTAGAGTCG GTTTCAGCTC ATGAATATCA GCGTCCTACG TTAGACTTAA GTCATGTGGC TTTGCTGCAG TATACGGGTG GCACCACAGG GGTAGCCAAA GGCGCTATGC TAACGCACGG TAATTTAATT GCCAATATGC TACAGATCAA TGCGGTAATG GACGCCGCTT TTGGCGACTC AAATGGCACT GAAGTTATCC TCACAGCGCT GCCTTTATAT CACGTGTTCT CTTTTATGGT GTGCGGTATG TATACCATGT ATAAAGGCTA TACCGGCCTA CTTGTTCCAA ATCCACGCGA CTTAGATGGC CTGATTAAAG AGATTGATAA GTATAAGCCG GCCTTTATCC CCTCTGTCAA TACTTTATTC AATGGCTTGG TGCATCATGA GAAGTTCAAA GATTTGGATT TTTCAAACCT AAAAGCCTCC ATTGGCGGTG GCATGTCTGT TCTACCCAGC GTCGCAAAAG CTTGGCATGA AGCCACTGGT CTGCCTATCG TAGAAGGTTA TGGCTTGTCT GAGACCTCGC CTGTGGTCAG TTTTAACCCC ATGAACATCT CTGAATTCAC CGCCAAAATT GGGGTGCCTG CCCCCGATAC CGATATTATC TTAATCGATG ATAACGGTCA GGTCATGCCG ATTGGTGAGC GCGGTGAGAT TTGTGTGAAG GGCCCACAAG TGATGGTTGG CTATCAAAAT CGTCCTGAAG AAACCAAAGA GGCTTTCACC GAAAATGGCT ACTTCAAAAC AGGTGATATC GGTATCTTAG ATGAAAAAGG CTTTATCAAA ATCGTTGATC GTAAAAAAGA CATGATTTTG GTGTCAGGTT TTAACGTATA TCCTAATGAG ATTGAGGAGG CTATGGCGCA GCATCCTGCT GTATTGGAAG TAGGTGCCAT TGGCATTCCT AATGATGAGC GTGGTGAGGA TCCCAAAATC TTCGTGGTCA AGAAAAAAGG CGCCAGTGTC ACCGAAAAAG AGCTGCTAGA CTTCGGTAGA AAGCAGTTAA CTGGTTATAA GCGCCCGCGT CATGTGCAGT TTGTGGATGA GCTACCAAAG TCAAACGTTG GCAAAATCCT GCGTAAAGAG CTGCGTAAGA TCGAAGGCTT AGAATAA
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Protein sequence | MTAASNSTQN TQLSDLHGTY PTYPDIPSDR PWFESYERYG ITSQIERPAD DTSLLEVFER NFARFGNRDA YICMGGSITY RELDTKSRQI AAYLQSLGLK VGDKVAAMMP NVLQYPVVAL GVLRAGMILV NVNPLYTSHE LEHQINDSGA KAIFIVESFA KTFEDVTDKG SVEHVVICSM GDMLGLVKGF VVNMVVRHIK KMVPSYSLPG SVSYKHALES VSAHEYQRPT LDLSHVALLQ YTGGTTGVAK GAMLTHGNLI ANMLQINAVM DAAFGDSNGT EVILTALPLY HVFSFMVCGM YTMYKGYTGL LVPNPRDLDG LIKEIDKYKP AFIPSVNTLF NGLVHHEKFK DLDFSNLKAS IGGGMSVLPS VAKAWHEATG LPIVEGYGLS ETSPVVSFNP MNISEFTAKI GVPAPDTDII LIDDNGQVMP IGERGEICVK GPQVMVGYQN RPEETKEAFT ENGYFKTGDI GILDEKGFIK IVDRKKDMIL VSGFNVYPNE IEEAMAQHPA VLEVGAIGIP NDERGEDPKI FVVKKKGASV TEKELLDFGR KQLTGYKRPR HVQFVDELPK SNVGKILRKE LRKIEGLE
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