| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2145 |
|---|
| Symbol | |
|---|
| ID | 5204604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2678363 |
|---|
| End bp | 2679823 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640600392 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001281035 |
|---|
| Protein GI | 148653942 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3487] Uncharacterized iron-regulated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.952251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.195139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAG CTACTTCGAA TCACTTGATC AAATCAAAAC TAACCACAGC GCTAATGGCA
ACCCTTATTG GTGCTTTAAC TTTATCAGGC TGTTCAAAAG AGGCAGATAA TGCAAGTGGT
GCAGAAAACA GCGCTGAAGT TACCAATGAA ACCACAGAGA CCAAAAATAC CCAGACGCTC
GCTGGTGATG AGGCTTCTGT TAATAAGCTA TTAACCAGTT ATGCCGATAT GGCTCAAGCC
GCTTATGAAG ACTCTTTAAG TGAAGCCAAA AAATTACAAG CCGCAGTAGA TGCCTTAGTG
GCCAACCCTA CTCAGCAGAA TTTAGAGGCA GCTCAAGCCG CTTATAAAGC TGCTCGCCAG
CCTTATTCAC AGACCGAAGT TTTTCGTTTT GATGAAGGTT TTGTGGGCAA AGACGACAAG
CGCGCTATCG GCAGCATCGA TGGCTGGGAA GGTCAGGTGA ACGCATGGCC ATTAGATGAG
GCCTTAATTG ATTATGTTGC AGACGGCTAT GCCGGCGAGT ACAACAGCAA AGACAATATT
ATTAATTCAG ACAAAATCAC TGTGGGCAGC ACAAGCCAAG ACACCAAGAC CATTACCCCT
GAGCTCTTGG CTGAGATGAA TGAGATTGGT GGCAGTGAAG CCAATGTCAC CACAGGCTAC
CATGCCATTG AGTTTTTACT TTGGGGTCAG GATTTAAATG GCGTGGGTGA AGGGGCAGGT
CAGCGCCCAG TTACCGATTA TATGGCCAAT GACAGCTGCA CCAGTGGCGA GGGCAATTCT
GCTGAAGCGG CAGTATGTGC TAAGCGCGGT GAGTACCTAA AAGCAGCCAC CCAGCTGTTG
GTTAATGATT TAACAGATAT GGTGGCTCAG TGGCAGCCCA ATACTGAAAA TACTTTGCGT
AGTGACTTGA TGGCTCGCAG CTCAGACAAT GCCGTACGCC AGATATTTTA TCAAATGGGT
AGCCTAGCTT TAGGAGAGCT TGCCTCAGAG CGTATGCAAG TGGCATTCGT TACTGGCTCC
ACTGAAGATG AGCACGAGTG CTTTAGTGAC TTGACGCATC TAAGCTATGC CAATAATGCG
CGCGGTATTG CTAACATCTT TAATGGCCAA TACAAAACAG TATCTGGCAG CACTGTGGGT
GATTATGGTA TTAAACAGTA CCTAATCGAT GCCGGTCAAA AAGACTCAGC TGAACAATTA
GATGCCGCCT TCAAAAAAGT AGAGGCAAGC TTCAATACCA TCGCTGAGCA GGGTGAGAAA
AACGGTATTA AAATTGATCA AATGATTGCG ACAGTGGGTC AAGCTACCAA GCAAGGCGTT
TCAGCTGAAG AGCAAAACAA ACGCCGCGGC TGGATGGAAT CTGCCATCAA TGATCTAAAA
TCTTTAACCG ATGTCTTAGA ATCATCTGCA AAAAGCATTG GTATTGATAA TCTAGACGCC
GATACAGGCT CGCAGTTTTA A
|
|---|
| Protein sequence | MALATSNHLI KSKLTTALMA TLIGALTLSG CSKEADNASG AENSAEVTNE TTETKNTQTL
AGDEASVNKL LTSYADMAQA AYEDSLSEAK KLQAAVDALV ANPTQQNLEA AQAAYKAARQ
PYSQTEVFRF DEGFVGKDDK RAIGSIDGWE GQVNAWPLDE ALIDYVADGY AGEYNSKDNI
INSDKITVGS TSQDTKTITP ELLAEMNEIG GSEANVTTGY HAIEFLLWGQ DLNGVGEGAG
QRPVTDYMAN DSCTSGEGNS AEAAVCAKRG EYLKAATQLL VNDLTDMVAQ WQPNTENTLR
SDLMARSSDN AVRQIFYQMG SLALGELASE RMQVAFVTGS TEDEHECFSD LTHLSYANNA
RGIANIFNGQ YKTVSGSTVG DYGIKQYLID AGQKDSAEQL DAAFKKVEAS FNTIAEQGEK
NGIKIDQMIA TVGQATKQGV SAEEQNKRRG WMESAINDLK SLTDVLESSA KSIGIDNLDA
DTGSQF
|
|---|
| |