Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2136 |
Symbol | thrS |
ID | 5205054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2666956 |
End bp | 2668890 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640600383 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001281026 |
Protein GI | 148653933 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000263348 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00165189 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTGCAA TTACTTTACC TGATGGCAAT GTAAAAGAGT TTGACGGTGC GACAACAGTG ATGGAAGTGG CTCAAAGTAT TGGCCCAGGC CTTGCTAAAG CAACAATCGC TGGACGTGTG GATGGTAAGC TTGTGGACGC AAGTGATCCG ATTACCCAAG ACGCAAGTGT TGAAATTGTG ACCGCAAAAG ACAAAGATGG CGTCGATATT ATTCGTCACT CTACCGCACA CTTACTAGGT CATGCGGTTA AGCAGTTGTA TCCTAACGTA AAAATGGTTA TTGGCCCTGT TATTGAAGAT GGCTTTTATT ACGACATTTT TAGTGAAAAG CCCTTTACCC CAGAGGATAT GGCCGCTATT GAAAAGCGTA TGGCGGAGCT GATCAAGCAA AATTACGATG TCATTAAGAA AATGACCCCA CGTGAAGAAG CGATTAAAAT CTTTGAAGAG CGCGGTGAAG ATTATAAGCT CAAGCTAATC GCAGATATGC CAGAGGAAAA AGAGCTGGGT CTGTATCATC ATCAAGAATA TGTGGATATG TGCCGCGGCC CACACGTACC AAACACCCGC TTCTTAAAAG TATTTAAACT GATGAAAATG AGCGGTGCGT ATTGGCGCGG TGATGCCAAA AATGAGCAGC TCCAGCGTAT CTATGGTACC GCTTGGGCAG ATAAAAAAGA TTTACAAGCT TATATCCAGC GTATTGAAGA AGCTGAAAAG CGTGACCACC GTAAAATTGG TAAAGCGCTG AATTTATTCC ATATGCAAGA GCAGTCGCCA GGTATGGTGT TCTGGCATCC AAATGGCTGG ACCATTTATC AAGTGCTTGA GCAATACATG CGTAAAGTAC AAAAAGACAA TGGTTATCAA GAGATCAAGA CACCACAGAT TGTTGACAGA AGCTTGTGGG AAAAATCAGG ACACTGGGGT AACTATGCGA CCAATATGTT CACTACCTCG AGTGAAAGCC GTGATTATGC AGTAAAACCG ATGAACTGCC CTTGCCACGT GCAAGTATTT AACCAAGGCC TAAAGTCTTA TCGTGAATTG CCAATTCGTT TGGCAGAATT TGGCTCTTGC CACCGTAATG AGCCTTCAGG CTCTCTACAT GGCTTGATGC GGGTACGCGG CTTTACTCAA GATGATGCTC ATATCTTCTG TACCCAAGCC CAAATTCAAG AGGAAGTAGC CAACTTTATT AAGCTAACCT TGGATGTCTA TAAAGACTTT GGCTTCGACC AAATTGAGAT GAAACTCTCT ACTCGCCCAG AAAAACGTGT GGGTACTGAC GAATCTTGGG ACATCGCCGA AAAAGCCTTG GCCGATGCGT TAGACAGCTC AGGTCTTGAG TGGGAGTATC TGCCTGGTGA AGGCGCATTT TATGGTCCAA AAATTGAATT TAGCCTAAAA GACAGCTTAG GCCGTGTGTG GCAGTGCGGT ACCATTCAGG TAGACCCCAA TATGCCTGAG CGCTTAGAGG CTGAGTTTGT CAATGAGAAC AATGAGCGTG AAACACCCAT TATGCTGCAT CGTGCGATTC TAGGATCGTT TGAGCGCTTC TTGGGCATGC TAATTGAGCA TTATGCCGGC TGGATGCCTG TATGGCTTGC GCCGCAACAA GTGGTGGTCA TGAACATCAC TGACAAGCAG GCTGATGCCT GTCAAAATGT GGCCAGCGAG CTACAAAATG CCGGTCTGCG CGCCATTACT GACTTGCGTA ATGAAAAAAT TGGATTTAAG ATACGAGAAA GAACACTAGA ACGTATTCCC TATATGCTAG TATTAGGGGA TAAGGAAGTT GAGTCAGGAC AGGTTAACGT ACGTACTCGT GAAGGCGAAA ACCTTGGCGT CATGTCTGTG GCCGACTTTA TCGAATTAGT ACAGAAAGCT GTCGCCCAAA AGGGTCGACT AACAACAAAA ACTGATGAGG AGTAA
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Protein sequence | MVAITLPDGN VKEFDGATTV MEVAQSIGPG LAKATIAGRV DGKLVDASDP ITQDASVEIV TAKDKDGVDI IRHSTAHLLG HAVKQLYPNV KMVIGPVIED GFYYDIFSEK PFTPEDMAAI EKRMAELIKQ NYDVIKKMTP REEAIKIFEE RGEDYKLKLI ADMPEEKELG LYHHQEYVDM CRGPHVPNTR FLKVFKLMKM SGAYWRGDAK NEQLQRIYGT AWADKKDLQA YIQRIEEAEK RDHRKIGKAL NLFHMQEQSP GMVFWHPNGW TIYQVLEQYM RKVQKDNGYQ EIKTPQIVDR SLWEKSGHWG NYATNMFTTS SESRDYAVKP MNCPCHVQVF NQGLKSYREL PIRLAEFGSC HRNEPSGSLH GLMRVRGFTQ DDAHIFCTQA QIQEEVANFI KLTLDVYKDF GFDQIEMKLS TRPEKRVGTD ESWDIAEKAL ADALDSSGLE WEYLPGEGAF YGPKIEFSLK DSLGRVWQCG TIQVDPNMPE RLEAEFVNEN NERETPIMLH RAILGSFERF LGMLIEHYAG WMPVWLAPQQ VVVMNITDKQ ADACQNVASE LQNAGLRAIT DLRNEKIGFK IRERTLERIP YMLVLGDKEV ESGQVNVRTR EGENLGVMSV ADFIELVQKA VAQKGRLTTK TDEE
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