| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2119 |
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| Symbol | |
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| ID | 5205410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2642392 |
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| End bp | 2643168 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600361 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001281009 |
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| Protein GI | 148653916 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.860412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAC CTGTTTTAAC TCATGAAGCG ATACGCACCT TTAACCCTGA GCCCAATTGT
CTAGAGGGTA AAACCATCTT AGTCACTGGC GCTGGTGACG GCATTGGCCG CGTGGCTGCT
TTAACCTATG CCAAATATGG CGCCACTGTA TTACTGCTTG GCAAAACGTT AAGCAAGCTT
GAGGCGGTCT ATGATGAAAT AGAAGCCGCT GGTGGTAAGC AGCCAGCCAT CATGCCGATG
AACCTAGAAT CAGCCAGCTA TAGCGATATG CAGCAATTGG CCAATCTCAT CCAAAGTGAG
ATTGGTACGC TGCATGGCGT GTTACACAAT GCTGGTATAT TGGGCGCCCT AACCCCGCTT
GAGATGTATG ATGTGGTGAC CTTCGAGCAG GTAATGCGAG TGAATACCAC CGCCACCTTT
ATGCTCACTC AAGTGCTTAT GCCCTTGGTC AAATCTGTAG ATAACGGCTC ATTTGTGTTC
ACAAGCAGCT CAGTGGGTAC GCATCCTCGC GCATTCTGGG GCGCGTATGC CTTATCAAAA
CAGGCGGTGG AAGGCATGAG TGACATATTC ACTCAAGAAA CCCAAAATAC CACCAGCCTA
CGCTTTAACT GTATCAATCC TGGCGCCACC CGCACCAACA TGCGCGCCCA TGCCTTTCCC
GGCGAGAACC CTATGTCATT AAAGACTGCT GAGGACTTAA TGCCGGCATA TGTCTGCTTA
ATGAGCGATG CCAGTATTGG GGTTAGAGGT CAAGTTATTG CATTACAACC TAAATAA
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| Protein sequence | MTQPVLTHEA IRTFNPEPNC LEGKTILVTG AGDGIGRVAA LTYAKYGATV LLLGKTLSKL
EAVYDEIEAA GGKQPAIMPM NLESASYSDM QQLANLIQSE IGTLHGVLHN AGILGALTPL
EMYDVVTFEQ VMRVNTTATF MLTQVLMPLV KSVDNGSFVF TSSSVGTHPR AFWGAYALSK
QAVEGMSDIF TQETQNTTSL RFNCINPGAT RTNMRAHAFP GENPMSLKTA EDLMPAYVCL
MSDASIGVRG QVIALQPK
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