Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2108 |
Symbol | |
ID | 5206777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2630498 |
End bp | 2630878 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640600350 |
Product | aspartate alpha-decarboxylase |
Protein accession | YP_001280998 |
Protein GI | 148653905 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0853] Aspartate 1-decarboxylase |
TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0321908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTGA CCTTATTAAA AGGCAAATTA CACCGTGCCC GCGTTACCCA TGCAGATTTG CACTATGAAG GCTCTTGTGG GATAGATGGC GACTTATTGG ATCTAGCTGG TATTCGTGAA AACGAATCCA TTGATATCTA CAACGTCAGC AATGGCAAGC GCTTTCGCAC TTATGCCATC CGTGCTGAAG CCGGCTCTGG TATTATTTCA TTAAATGGTG CTGCCGCTTA TATGGCAGAC TTAGGCGACA TCGTTATCAT TTGTGCTTAC GCTCAGATGG ATGAGCAAGA AGCCGATACG CATAAACCAA AACTAGTCTA TTGTAATGAA GACAATACTG TAAAAGATAC GGCCAATATC ATTCCGGTCC AAGTGTCTTA A
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Protein sequence | MLLTLLKGKL HRARVTHADL HYEGSCGIDG DLLDLAGIRE NESIDIYNVS NGKRFRTYAI RAEAGSGIIS LNGAAAYMAD LGDIVIICAY AQMDEQEADT HKPKLVYCNE DNTVKDTANI IPVQVS
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