Gene PsycPRwf_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2108 
Symbol 
ID5206777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2630498 
End bp2630878 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content43% 
IMG OID640600350 
Productaspartate alpha-decarboxylase 
Protein accessionYP_001280998 
Protein GI148653905 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0321908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTGA CCTTATTAAA AGGCAAATTA CACCGTGCCC GCGTTACCCA TGCAGATTTG 
CACTATGAAG GCTCTTGTGG GATAGATGGC GACTTATTGG ATCTAGCTGG TATTCGTGAA
AACGAATCCA TTGATATCTA CAACGTCAGC AATGGCAAGC GCTTTCGCAC TTATGCCATC
CGTGCTGAAG CCGGCTCTGG TATTATTTCA TTAAATGGTG CTGCCGCTTA TATGGCAGAC
TTAGGCGACA TCGTTATCAT TTGTGCTTAC GCTCAGATGG ATGAGCAAGA AGCCGATACG
CATAAACCAA AACTAGTCTA TTGTAATGAA GACAATACTG TAAAAGATAC GGCCAATATC
ATTCCGGTCC AAGTGTCTTA A
 
Protein sequence
MLLTLLKGKL HRARVTHADL HYEGSCGIDG DLLDLAGIRE NESIDIYNVS NGKRFRTYAI 
RAEAGSGIIS LNGAAAYMAD LGDIVIICAY AQMDEQEADT HKPKLVYCNE DNTVKDTANI
IPVQVS