| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2073 |
|---|
| Symbol | |
|---|
| ID | 5205197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2586967 |
|---|
| End bp | 2587707 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640600313 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001280963 |
|---|
| Protein GI | 148653870 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGATT TGCAAGGTTT TGGACATCTC TTACTTAGTG GCTCGTTGAT TACCATCAAA
CTTGCTTTAT CAAGTCTTGC AATAGGTTTG GTATTGGGGC TATTGGGCGC TACTGCGAAG
CTCTCAAAAA TTTGGATATT ACGCAAGTTG GCGACGGTAT ATACCGCGAC CATGCGTGGC
ATCCCAGAGC TGTTATTAGT GCTGTTTTTA TACTACGGCG GCTCCATGCT GATTATGGCC
ATATTACAAA AATTTGGCTA TAACGACTAT GTGGAAGTGA GTCCGTTTTT GGCAGGTGTG
TTGGCACTAT CTATTGCCTT TGGGGCGTAT GCGACCGAAG TGTTTCGCAT GGCGATCCAA
GAGATTCCCA AAGGGCAATG GGAAGCAGCT GAAGCCATAG GTATGAAGCC AATGCAGCTT
TATTTTCGCA TCATAGTGCC CCAGGTTTGG CGCTTGGCGC TGCCAGGTCT GGGAAACTTG
TTTTTGGTAT TGTTAAAAGA TACGGCCCTG GTTTCTGTGG TGGGTCTAAA GGACATCATG
TACCATGCGG CGCGCGGGGC ACAGGCCACG CAGCAGGCCT TTACCTTTTA TATGGCGGCC
GCTTTTATTT ATCTGGGTCT AACCATAGTG GTGACCGCCT TTATGATGTG GCTTGAGTGG
CGGGCCAACC CGTCAAAACG CTATGCAAAA AAATTGGCAA AGCAGCAAGT TTCACACTCA
CTAGATGCAG CACAAGGGTA G
|
|---|
| Protein sequence | MFDLQGFGHL LLSGSLITIK LALSSLAIGL VLGLLGATAK LSKIWILRKL ATVYTATMRG
IPELLLVLFL YYGGSMLIMA ILQKFGYNDY VEVSPFLAGV LALSIAFGAY ATEVFRMAIQ
EIPKGQWEAA EAIGMKPMQL YFRIIVPQVW RLALPGLGNL FLVLLKDTAL VSVVGLKDIM
YHAARGAQAT QQAFTFYMAA AFIYLGLTIV VTAFMMWLEW RANPSKRYAK KLAKQQVSHS
LDAAQG
|
|---|
| |