| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1934 |
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| Symbol | |
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| ID | 5204801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2400278 |
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| End bp | 2401381 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600166 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001280824 |
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| Protein GI | 148653731 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00169189 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCG TTTTAACCCT AGCTGGCGAT GGCATTGGCC CTGAAATTAT GACTCAGGCT
GTGGCTGTAT TAGAAGCTGT AAATGACAAG TTTGACTTAG GTTTAAGCTT GGAGACGGCA
GATATCGGCG GTATCGCTAT CGATAATGCT GGCGTGCCAC TGCCTGATGA AACTTTGGCG
AAAGCCCGTG CGGCAGATGC GGTATTATTA GGTGCTGTGG GTGGGCCTAA ATGGGATGGC
ATTGAGCGCA GTATTCGTCC TGAGCGTGGT CTATTAAAAA TTCGCAGTGA GCTGGGTTTG
TTTGCCAACT TACGGGTGGC CAAGCTGTAC CCTCAGCTGG CTAATGCCTC AAGCTTAAAG
CCGGAAATCA TCTCAGGTCT AGACTTGCTT ATCGTGCGTG AGCTGACGGG TGGTATTTAT
TTTGGGGAGC CACGCGGTAT TCGCACCTTA GACAATGGCG AACAGCAAGG TTACAACACC
ATGGTGTATA AGACCTCTGA GATTGAGCGT ATTGGTAAAG TGGCCTTTGA TTTGGCGCAA
GTGCGTGCTA AAGCCAATGG CACACCCGCC AAAGTATGTT CAGTGGACAA AGCCAATGTG
TTAGAGGTCA CCGAGCTTTG GAAGCAGACC ATGATTAAGC TGCAACAGGC TGACTATAGC
GACGTGGACT TAAGCCATAT GTATGCCGAT AATGCCTGTA TGCAATTGGT AAAAAATCCC
AAGCAGTTTG ATGTGATGGT GACGGGTAAT ATGTTTGGCG ATATCTTATC GGATGAGGCC
GCCATGTTGA CCGGCTCTAT CGGTATGTTG CCATCAGCGA GCTTAGATGA GCATGGTAAA
GGCATGTATG AGCCTTGCCA CGGCAGTGCA CCAGACATTG CTGGTCAAGA CAAAGCCAAC
CCCCTAGCCA CCATCTTATC AGTTGCTATG ATGCTGCGTT ACACCTTTAA GCATGAAGCT
TCTGCTGCGG CAATTGAGCA AGCTGTAAGC GATGTGCTAG ATGATGGCTT GCGTACGGGT
GATATTATGG ATGCTGATGA AACAGGCTTA ACCTTGGTAG GCTGTAAACA AATGGGTGAG
GCAGTATTGG CCAAGCTAAG CTAA
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| Protein sequence | MATVLTLAGD GIGPEIMTQA VAVLEAVNDK FDLGLSLETA DIGGIAIDNA GVPLPDETLA
KARAADAVLL GAVGGPKWDG IERSIRPERG LLKIRSELGL FANLRVAKLY PQLANASSLK
PEIISGLDLL IVRELTGGIY FGEPRGIRTL DNGEQQGYNT MVYKTSEIER IGKVAFDLAQ
VRAKANGTPA KVCSVDKANV LEVTELWKQT MIKLQQADYS DVDLSHMYAD NACMQLVKNP
KQFDVMVTGN MFGDILSDEA AMLTGSIGML PSASLDEHGK GMYEPCHGSA PDIAGQDKAN
PLATILSVAM MLRYTFKHEA SAAAIEQAVS DVLDDGLRTG DIMDADETGL TLVGCKQMGE
AVLAKLS
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