| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1918 |
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| Symbol | |
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| ID | 5205235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2381687 |
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| End bp | 2382793 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640600150 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001280808 |
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| Protein GI | 148653715 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.794577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TCAAGCTACG CATCAAAGAC AAACACGTAA ACCAGCTAAA CAAACTAGCT
GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC
ACAGGTAAGT ACTTTTCAGC CTATGATTTA AGCCCATACA CCAAAGGCAG TGGTGAGTAT
TTAGGCTTGC ACTCGCAAAC TTTGCAAGCC ATTAACGAGA CTCATGCCAA ATCTCGTAAA
CAGTTTAAAA AAACTAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGCAAATCG
CTTGGTTGGA TACCTTTTAA GAAATCTGCC ATCAAGTATC TAAATACAAG ACAAACGGGG
AAGAAAACAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATT
GATGTATTTG ATAGCTATAA TCTAAGCCTA TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTA ACCGTTGGTA TGCCTGTATT ACCGTCAAAT ATTTTCCTAG ACAAGCAAGT
GGCAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGCAGT CTGCTACCAC ATCAAACGGT
GACAAGCTGA CAACCAAACA AACGCAAAAG TGGGCTAAAA AGCTTGCAAT AGCTCAAAGA
GCGAAAAACA AACAGCGAGT CAAAGCAATC CATGCCAAGA TCAAAAACAC AAGATTAGAC
TTAATTCATA AATTCACCAC CAAGTTAGTG CAGAGCAATG CTTTAATTGT GGTTGGTGAT
GTTAAATCAC GCTCATTCAC CAATTCGATG ACCAACCTAG CTAAATCAAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT
GAGATAGTGA ATGAGAGTTA CACTACCCAA ACCTGTTCGC ACTGCCTTAA AATAAGTGAT
AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTAGCTGTAG GAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHVNQLNKLA GSVNYAWNYV NALSFEHLRR TGKYFSAYDL SPYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKTKLNWR TNRPDAKRKS LGWIPFKKSA IKYLNTRQTG
KKTLKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKYFPRQAS
GKGSVGIDLG LKQSATTSNG DKLTTKQTQK WAKKLAIAQR AKNKQRVKAI HAKIKNTRLD
LIHKFTTKLV QSNALIVVGD VKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL
EIVNESYTTQ TCSHCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LAVGIPSV
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