Gene PsycPRwf_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1880 
Symbol 
ID5206544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2338441 
End bp2338956 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID640600111 
Producthypothetical protein 
Protein accessionYP_001280770 
Protein GI148653677 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTC ATAACCCTTC TGATTACGAG TCATTAGACT CTGAGCATAC TTCTTACACT 
GACGACGACA CGGCCTTTGA AGCAACTAGT GGTGCTGAGC TAGAAGCCGC GGACTCTGGG
CACAACTCTG ATATCGAAAT TATTACCCCA GATGACCTAA CTGATACCTC AAGCGCTTTT
GAAAATCAGC CTGAGCAGAC ACAAGATGAG GCCCCACAAG AGCCTCAATT CATGCCAGTT
GATATTACCA TCTTAGAAAA AAATTATACT ATTAACTGCC CAGTGGGTGA AGAAGGCGAG
CTGTATTCAG CCAGCCAATT TATCAATAGT TTTATCCAAG ATCTACAGGC CAATGCCCCG
CAGCTGCCTC AAGAGAATCT ATTGGTACTG TGCTGCTTAA ATCTGTATGA AAAAATGCAA
CAAGCCAAGC TACAAGCAGC CGCTAATGAA AGCGACATCG CGCAGGCCAA TGAGCTGTTA
GAGCATATGA TTCGTGAGAT GCAGCTTAGC GACTAA
 
Protein sequence
MSTHNPSDYE SLDSEHTSYT DDDTAFEATS GAELEAADSG HNSDIEIITP DDLTDTSSAF 
ENQPEQTQDE APQEPQFMPV DITILEKNYT INCPVGEEGE LYSASQFINS FIQDLQANAP
QLPQENLLVL CCLNLYEKMQ QAKLQAAANE SDIAQANELL EHMIREMQLS D