| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1738 |
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| Symbol | |
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| ID | 5206005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2149353 |
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| End bp | 2152460 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599963 |
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| Product | ComEC/Rec2-related protein |
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| Protein accession | YP_001280628 |
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| Protein GI | 148653535 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0658] Predicted membrane metal-binding protein |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.93623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.347072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTTG TGGCACTGGT TGTGATGTTG GCCATTTTGC AGATGACGCC TGATCAGCTG
TTATTGATGG GGTATCAACT AGCCCCTGAC GTCGGAGCAG AACGTTGGCA GTACGCCAGT
TATGTGCAGC TTATCGGTTT AGCGCTGGTG TGGCTACTGC GCTATGGATA TATGGTTTGG
TATAGGCGCC GGTTGTCTCA TTCAATCGGC GTGGCTGCCC AGCCGCAGCT TTTGCCGTTT
GCGCCTTATA CTCAAGTTGC GTCTTATACT AAAGCGCCCT CTTTGGTTAT TAATCACTCC
GTTTATCTGC TTGCGCCCGC CACTACCACT AACACTAACT CCTCAGCTTT TGCTAAACCC
TCAATATCAC CCTCATATTT TGCACTGCCT AGGATTTTTA AAAAGCCAAC TGTTTCAGGC
ATTGTGCCCG CTTTATTAAC CTTAATTGCT GTGGGTCTGT TTTGGTCAGC TACGTTATGT
CATAGTGTGG CACAGCGTCT GAGCGCCATT GAGCAGGCAC CGACAAGGCC CCTCTATGTC
AACGCCTTGG TTACGCCTAT TGGCTTAAGT GACAAAAGGC TCACCTTTGA GGCTGCTAAA
GCAGTGTCAC TGTCCTCTGA GGGAGGTGTA AACCCAAAGT TAAACCCTCA AAAAAAGCAG
GTGGCGCAAG GCTATCGCCA ATTGGTACGC TTAACCAATA TACGCCCGTA TCACTCTATG
GCTGCTACTG CCTCACAGCA AGGCATTATT CAATTAGACA ATCCATTTTA TCTGGCCAAT
CCCACTCAAA AAATACCGAA TAAAAACTCT GTCAGCCAAA ACACCTCAAA GACCCAAGCG
TTATCCCGTA ACGCACCTGC CCAAAGCCGC TTACCCAGTA GTATGACAGT GATGTTACAA
AGTTATCACG GTCAGCAGCA GTGGCTCAAT GATCTGGCAG CCAATCAGCA GCTGACCATG
TCTTTAGCGC TTACTCCTAT TGAATTTAAA GCGCATGATG AGGTAGAAGA CTTCGATGAG
TATCGTTGGC TAAGTAGCCG CCATGCCACT GCACAGGCAA AGCTTATCCA TGCTGATGTT
AAAAAAGCAT TCATCAACCC TAAGCTTAGT GTGCCCCAGA CAATTAATCA GCAGCGTTTT
TTATTGCGTG AGCACTTTTT GGTATTAAGG CAGCAGCGCA CGGCACGCGA TCCTCAGCAA
ATAAATCCAC AGCAAGGGCT GGCGGTGACT TTAAGCCTGC TCACCGGTGA CCGCAGTTTA
ATCAGTCAAG AGATGAGCGG CTTATATCGC TTTGCAGGGA TATCCCATTT ATTGGCAATC
TCCGGTACCC ATGTTTTATT CTTGGCCCTG CTGTGTGCAG GGATAGTTAC CACGATAATT
ACTTGCTTTT GGCCTATCTG GTATGCTCGC ATACCGCGGT GGCAGTGGGC GTTTGGTATC
GCTGTGGTGG TCGCCTTTGG CTATGCATTA TTTGCAGGCT TTGATGTCCC AGCAGTGCGT
ACGGCGTTTA TGCTACTTAT TGTGGGGGTG CTGCGTTATG TGTTGGCAGC GCCGGCTACG
TTAAAAGTGC TGCTGTGGCT AGCAGTGGGC ATGGCTTGGG TCGATATTTT TGTATTATGG
CAAGCTGGGT TTTGGCTATC TTTTATAGCA GTCGCAGCTT TGGTGGCTTA TGGTCAGCGC
TGGCAGGTGA GCCCCTCTTC TAGACAGGAG GTGGGTCGTG CTACAAACAC CGGCGTCTTG
CAGCGTTTAA GGGTGACGCT TAAAGCGCAC TTTGTGGCCT TATTTAAACT ACAAATGTGG
ATGTCGGTGG CTTTATTACC GCTGAGTTTA TGGCTGTTTG GCAAAGTACC TTTGTGGGGC
TTTGTCATTA ATTTATTTGC CATTGGTCTA TTTGGCTGGG TGATTGTGCC GCTAAATTTG
TTAGCAGGTA TACTGTATGC GGCTTGGCCT AGCAGCTCAG TGTTGCCGGA TAAAATCTGG
TCCTTTTTAT TTTGGCTGCT CGATGGTTTG CATCAGCTGC TTTTTCAGCT ACAAACCCGT
TTTGAGCAAG TAGGCTGGCT TTATACTGAG CTTGATATCT CACTGCTGTT GTTGCTGTTT
ATGGTGCTAC TGCCATTTTT GTTGCCTAAA GGCGTGCTTA ACAGATTGCT TGCGCTAGCG
CCATTGAGTC TGATCGCGGC CATGAGTGTT GCTTCAACGA CGGCTCAACA CCGCTTAGCT
GAGTCTCGAT CAAGTGCTAC AAGCCTTGAT ACGCAAGCAG TAAACATAAA GGTGCTTAAT
CTAAATAATT TGCAGTATGC CGCCACCCTT ATTTATAGTC ATTCAGATGC TTGGCTGTTG
TTATCGGGCT ACCCTAAAGC CTATCTACAG TCGAGCCCGC AACTAACTGA TGAGCAAACC
AAGCAGATAT CAACCGCTTT GTACGATCAG ATACAGCGCC AAGATATAAA GCAGCTGACC
GGAGTGGTGG TGCAAACAAA TACCCCTGAG CTGGCGGCTG TGGTGTCTAA ATTAGATGAG
TATATTCCAC TGTCATATTA TTGGCAGGCA GGCCTTAACG CTAATAAGAC GATGATACAA
GCTCAGATGC AGGGCAGTAC ACTACTGGCA CAAAGCTGTG AGGCCAACCA AAGCTGGCAG
ACGCAGCACC GCTCTGAGGA GGGTGGCGGC TGGTCATTAA CTGCTGTTAC CGGCTGGCCA
CAGCTTAATG ACAGACAGCT TTTAGATTGC ACGCTTAAGC TTAGCGGCAT GCAGACATTT
TGGCTGCATG ACCAACAAGA TCTGCGTGCG CTGACAGCCA AGCCTAAAAG GTATGCTCAG
CATAAGGCGG GGGCAAGCTT AGCGCCAAGC GCACACAATG CAGTGATTTT TTATAGTAGC
CGGCAGGCCA AGCTTGGCAA GTTGTGGCCG CTTATGTGTG AGCAAACAGA TCAAGTCTTG
GCTCAGCACT GGATTACCCC ATCTCAAGCG TATCTGGCTC CGGCTTTAAT TGACGTATTT
CAGCCCTTAA CCTGGCATAT TGGTGGTCAA GTATTTAGTA GAACCACTGT GAAGTTAAAA
GACAGTCATT TGTACTGGCA GCAGCACTAT CTTATGAGTG ATGAGTAA
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| Protein sequence | MALVALVVML AILQMTPDQL LLMGYQLAPD VGAERWQYAS YVQLIGLALV WLLRYGYMVW
YRRRLSHSIG VAAQPQLLPF APYTQVASYT KAPSLVINHS VYLLAPATTT NTNSSAFAKP
SISPSYFALP RIFKKPTVSG IVPALLTLIA VGLFWSATLC HSVAQRLSAI EQAPTRPLYV
NALVTPIGLS DKRLTFEAAK AVSLSSEGGV NPKLNPQKKQ VAQGYRQLVR LTNIRPYHSM
AATASQQGII QLDNPFYLAN PTQKIPNKNS VSQNTSKTQA LSRNAPAQSR LPSSMTVMLQ
SYHGQQQWLN DLAANQQLTM SLALTPIEFK AHDEVEDFDE YRWLSSRHAT AQAKLIHADV
KKAFINPKLS VPQTINQQRF LLREHFLVLR QQRTARDPQQ INPQQGLAVT LSLLTGDRSL
ISQEMSGLYR FAGISHLLAI SGTHVLFLAL LCAGIVTTII TCFWPIWYAR IPRWQWAFGI
AVVVAFGYAL FAGFDVPAVR TAFMLLIVGV LRYVLAAPAT LKVLLWLAVG MAWVDIFVLW
QAGFWLSFIA VAALVAYGQR WQVSPSSRQE VGRATNTGVL QRLRVTLKAH FVALFKLQMW
MSVALLPLSL WLFGKVPLWG FVINLFAIGL FGWVIVPLNL LAGILYAAWP SSSVLPDKIW
SFLFWLLDGL HQLLFQLQTR FEQVGWLYTE LDISLLLLLF MVLLPFLLPK GVLNRLLALA
PLSLIAAMSV ASTTAQHRLA ESRSSATSLD TQAVNIKVLN LNNLQYAATL IYSHSDAWLL
LSGYPKAYLQ SSPQLTDEQT KQISTALYDQ IQRQDIKQLT GVVVQTNTPE LAAVVSKLDE
YIPLSYYWQA GLNANKTMIQ AQMQGSTLLA QSCEANQSWQ TQHRSEEGGG WSLTAVTGWP
QLNDRQLLDC TLKLSGMQTF WLHDQQDLRA LTAKPKRYAQ HKAGASLAPS AHNAVIFYSS
RQAKLGKLWP LMCEQTDQVL AQHWITPSQA YLAPALIDVF QPLTWHIGGQ VFSRTTVKLK
DSHLYWQQHY LMSDE
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