Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1608 |
Symbol | |
ID | 5206710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1986547 |
End bp | 1987866 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640599830 |
Product | major facilitator transporter |
Protein accession | YP_001280499 |
Protein GI | 148653406 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000040432 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATCAC AATTTACCCT GTTTCGCAGT CGCCGCTTTA CGCCGATGTT TTTTACCCAA TTTTTGGGTG CTTTTAATGA TAACTTTTTT AAACAAGCGC TGCTTTTGGT TCTAACCTAT AGTGCAGCGG CCAAGTTAGG TGCCTCAGTT AGTTTACTGA ACAATTTGGC CGCCATGTTG TTTATTTTGC CTTTTTTCTT ATTTTCTGCC CTAGCAGGAC AATTGGCCGA TAAATATGAA AAGTCACGCC TAACTTGGTA TATCAAAGTG TTAGAAGTGG TCATTATGCT ACTGGCCGCT TTTGGGCTGA TTTTTGAAAT TTATTGGCTG CTATTTTTGG CGCTATTTTT ATTAGGTGCC CAGTCCACTT TCTTTGGCCC CATTAAATAC GCTTATTTGC CTCAAGCGAT GCAAAAAGAT GAGCTGGTCG GTGCCAATGG CCTGTTTCAA ACCGGCACGT CCCTGTCGAT CCTAACCGGT ATGATGTTTG CCGGCTTATT TACCCAAATG GAAAACCATT TGTATTGGGT CAGTGCCATG GCGTTACTGA TTGCCGCTTT GGGCTTGTTG GCCGCCAAAT TTATTCCAAG AATGCCTGCC GTACAGCCTG ACTTAAAAGT GAACTGGAAT ATCTTTAGCA CCAGTATGGA CACCATTAAG TATCTGTATT CGCTGCCATT GTTGTTTTTT ATCATCTTAG GTAACAGCTG GTTTTGGTTC TATGGCGCTA CCTTTTTGAC CCAGACTCCT GAGTTTAGTA AGGTTATTTT ACAAGGCAAT GAATCTGTGG TTATCTTTTT ACTCACCTTA TTCTCAGTGG GGGTCGCTTC AGGGTCTTTG TTATGTAAAA CATTGACCAA AAATCAGGTG AGCTTTAAGT TACTGCCCTT TGGTATCGCA GGGCTCAGCC TATTTGCCAT AGATTTATAT TTTTCGTTAT CTGCACTTAC TATCAGTACT GGCAGCTTAT TAGGTATTGC GGAGTTGTCT GAGGTGAGCG GTAGCTTTCG GGTATTTGCA GATCTATTTT TCTTAGGCTT TAGTGGCGGT ATTTATATTG TGCCTTTGTA TGCGGCGATG CAGGCTTACT CACCTATTAG TCACAGGGCG CGAGTCATTG GCGCCAACAA TATCTTTAAT GCCATTTTTA TGGTCAGCTC CGCCATCTTT TCTATCGTGA TTTTAAATCT ATTAAAAATG CCTTTGCCGC AGCTGTTCTT AGTGACGGGT ATCTTAAATA TCTTATTTGG GATAATGCTA TATTTTAAAT TAAAAAAATA TCAAGGCACC CTGAGTATTC AAGAAGACGC GCTTATCTAA
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Protein sequence | MASQFTLFRS RRFTPMFFTQ FLGAFNDNFF KQALLLVLTY SAAAKLGASV SLLNNLAAML FILPFFLFSA LAGQLADKYE KSRLTWYIKV LEVVIMLLAA FGLIFEIYWL LFLALFLLGA QSTFFGPIKY AYLPQAMQKD ELVGANGLFQ TGTSLSILTG MMFAGLFTQM ENHLYWVSAM ALLIAALGLL AAKFIPRMPA VQPDLKVNWN IFSTSMDTIK YLYSLPLLFF IILGNSWFWF YGATFLTQTP EFSKVILQGN ESVVIFLLTL FSVGVASGSL LCKTLTKNQV SFKLLPFGIA GLSLFAIDLY FSLSALTIST GSLLGIAELS EVSGSFRVFA DLFFLGFSGG IYIVPLYAAM QAYSPISHRA RVIGANNIFN AIFMVSSAIF SIVILNLLKM PLPQLFLVTG ILNILFGIML YFKLKKYQGT LSIQEDALI
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