Gene PsycPRwf_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1608 
Symbol 
ID5206710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1986547 
End bp1987866 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content41% 
IMG OID640599830 
Productmajor facilitator transporter 
Protein accessionYP_001280499 
Protein GI148653406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000040432 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATCAC AATTTACCCT GTTTCGCAGT CGCCGCTTTA CGCCGATGTT TTTTACCCAA 
TTTTTGGGTG CTTTTAATGA TAACTTTTTT AAACAAGCGC TGCTTTTGGT TCTAACCTAT
AGTGCAGCGG CCAAGTTAGG TGCCTCAGTT AGTTTACTGA ACAATTTGGC CGCCATGTTG
TTTATTTTGC CTTTTTTCTT ATTTTCTGCC CTAGCAGGAC AATTGGCCGA TAAATATGAA
AAGTCACGCC TAACTTGGTA TATCAAAGTG TTAGAAGTGG TCATTATGCT ACTGGCCGCT
TTTGGGCTGA TTTTTGAAAT TTATTGGCTG CTATTTTTGG CGCTATTTTT ATTAGGTGCC
CAGTCCACTT TCTTTGGCCC CATTAAATAC GCTTATTTGC CTCAAGCGAT GCAAAAAGAT
GAGCTGGTCG GTGCCAATGG CCTGTTTCAA ACCGGCACGT CCCTGTCGAT CCTAACCGGT
ATGATGTTTG CCGGCTTATT TACCCAAATG GAAAACCATT TGTATTGGGT CAGTGCCATG
GCGTTACTGA TTGCCGCTTT GGGCTTGTTG GCCGCCAAAT TTATTCCAAG AATGCCTGCC
GTACAGCCTG ACTTAAAAGT GAACTGGAAT ATCTTTAGCA CCAGTATGGA CACCATTAAG
TATCTGTATT CGCTGCCATT GTTGTTTTTT ATCATCTTAG GTAACAGCTG GTTTTGGTTC
TATGGCGCTA CCTTTTTGAC CCAGACTCCT GAGTTTAGTA AGGTTATTTT ACAAGGCAAT
GAATCTGTGG TTATCTTTTT ACTCACCTTA TTCTCAGTGG GGGTCGCTTC AGGGTCTTTG
TTATGTAAAA CATTGACCAA AAATCAGGTG AGCTTTAAGT TACTGCCCTT TGGTATCGCA
GGGCTCAGCC TATTTGCCAT AGATTTATAT TTTTCGTTAT CTGCACTTAC TATCAGTACT
GGCAGCTTAT TAGGTATTGC GGAGTTGTCT GAGGTGAGCG GTAGCTTTCG GGTATTTGCA
GATCTATTTT TCTTAGGCTT TAGTGGCGGT ATTTATATTG TGCCTTTGTA TGCGGCGATG
CAGGCTTACT CACCTATTAG TCACAGGGCG CGAGTCATTG GCGCCAACAA TATCTTTAAT
GCCATTTTTA TGGTCAGCTC CGCCATCTTT TCTATCGTGA TTTTAAATCT ATTAAAAATG
CCTTTGCCGC AGCTGTTCTT AGTGACGGGT ATCTTAAATA TCTTATTTGG GATAATGCTA
TATTTTAAAT TAAAAAAATA TCAAGGCACC CTGAGTATTC AAGAAGACGC GCTTATCTAA
 
Protein sequence
MASQFTLFRS RRFTPMFFTQ FLGAFNDNFF KQALLLVLTY SAAAKLGASV SLLNNLAAML 
FILPFFLFSA LAGQLADKYE KSRLTWYIKV LEVVIMLLAA FGLIFEIYWL LFLALFLLGA
QSTFFGPIKY AYLPQAMQKD ELVGANGLFQ TGTSLSILTG MMFAGLFTQM ENHLYWVSAM
ALLIAALGLL AAKFIPRMPA VQPDLKVNWN IFSTSMDTIK YLYSLPLLFF IILGNSWFWF
YGATFLTQTP EFSKVILQGN ESVVIFLLTL FSVGVASGSL LCKTLTKNQV SFKLLPFGIA
GLSLFAIDLY FSLSALTIST GSLLGIAELS EVSGSFRVFA DLFFLGFSGG IYIVPLYAAM
QAYSPISHRA RVIGANNIFN AIFMVSSAIF SIVILNLLKM PLPQLFLVTG ILNILFGIML
YFKLKKYQGT LSIQEDALI