| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1594 |
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| Symbol | |
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| ID | 5205599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1961845 |
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| End bp | 1963344 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599816 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001280485 |
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| Protein GI | 148653392 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000232472 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGGCGATT GGCCAGAAGA TTTTGAATAT GTGCTGGGTT TGCAAGAAGC GTCCGCCGTT
GGTATGGCTG ATGGTATGGC ACGAGCCACA GGTCGTCCGA CATTCGTTAA CGTGCATTCA
GCCGCAGGTC TTGGTAATAG TTTAGGTAAC TTATTTACCG CCTATAAAAA CCAAGTGCCT
ATGGTGGTGA TGGCAGGTCA GCAAGGCCGC TCATTATTAT CATCAGAAGC ATATCTTGCT
GCAGATGATG CAGCAAGCTT CCCTAAGCCT TATGTTAAGT GGTCCGTAGA GCCGGCCACT
GCACAAGATG TACCAGCGGC ATTGGCACGC TGCTTCGAGA TTGCGATGCA GCCTCCCTAT
GGTCCCACCT TTATCTCTGT ACCTAATGAT GATTGGGACA AGCCTTGTGA CCCTGTTAAA
GTCGTCGATG CCATTGGCTT TGGTCCAGCA CGTAAAAATG GTCTTGAGCG CGTTGCAGAG
GCACTCTCTA AAGCAAAACG TCCGGCGTTA GTCGTGGGTA CTGAAATCGA TATTTTTGAT
GCGTATGATA ATGCAGTGAC GCTTGCCGAG CGCACAGGCG CAACCGCATA TGTTGCACCA
GTAGTAGCAG CAGCAGCTTT CCCTGAAGAT CATCCGCAAT TTGGTGGCTT CTTACCGGCT
ATTCCAGAAA ATCTATCAAA AATGCTTGAG CGTCACGACT TGGTTGTCGT GGCTGGTGCA
CCAGTATTTA CCTTCCACGT TGAAGGAGAG GCCGCCGTAT TAACCTATCC AGATATTAAG
GTGATGCAGC TAACCTCAGA TCCAAATGCG GCTGCCCGTG CAAAAGCAGA TCTAAGCTTG
GTGGGTGAGC TAAACGAATC CCTTGAAAAA CTGATTGAGC TATTACCAGA AAAACCTGCC
GCTGATGTGG CCAAACCTTT CGCCATTGAG CGCAGCACGC CAGAAAAAGG GGACAGTAAA
CCTTCAGCTG CTTATGTGCT ATCTAGACTC AGCGAGCTTA TGCCAAAAGA TGCTATTTTG
GTAGAGGAAG CACCGTCTCA CCGTCCTGCA CTGCAAAAGA ACTTGCCAGT GACTCAAAAA
GGCGGTTTTT ATACCATGTC AAGTGGCGGT CTGGGTTATG GCTTACCAGC ATCAGTGGGT
ATCGGGCTTG CGCAAGATGA GCGCAAAGTG GTCGCAGTGA TTGGTGATGG CTCAATGCAG
TACTCAATTC AAGCATTGTG GACCGCAGCT CAGCATGGCT TACCGTTAAC CATCATCGTG
CTTAATAACA GTGGTTATGG TGCACTAAAA GCGTTCTCAG ACATCATGGG CACTTCTAAT
ACCCCAGGTA TGGACTTGCC AGAAATTGAT ATTACCCAAA TTGCTCTCGG TTATGGTTGT
CATGCCTCTA AGGTGGACAA TGTGGATGAG TTAGATGAGG CGCTAAGCGC AGCATTAAAT
GACCCACGCC CTCATGTGAT TGATGTCATT GTTGATCCTA ATCAAGGTAA CGTTTACTAA
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| Protein sequence | MGDWPEDFEY VLGLQEASAV GMADGMARAT GRPTFVNVHS AAGLGNSLGN LFTAYKNQVP
MVVMAGQQGR SLLSSEAYLA ADDAASFPKP YVKWSVEPAT AQDVPAALAR CFEIAMQPPY
GPTFISVPND DWDKPCDPVK VVDAIGFGPA RKNGLERVAE ALSKAKRPAL VVGTEIDIFD
AYDNAVTLAE RTGATAYVAP VVAAAAFPED HPQFGGFLPA IPENLSKMLE RHDLVVVAGA
PVFTFHVEGE AAVLTYPDIK VMQLTSDPNA AARAKADLSL VGELNESLEK LIELLPEKPA
ADVAKPFAIE RSTPEKGDSK PSAAYVLSRL SELMPKDAIL VEEAPSHRPA LQKNLPVTQK
GGFYTMSSGG LGYGLPASVG IGLAQDERKV VAVIGDGSMQ YSIQALWTAA QHGLPLTIIV
LNNSGYGALK AFSDIMGTSN TPGMDLPEID ITQIALGYGC HASKVDNVDE LDEALSAALN
DPRPHVIDVI VDPNQGNVY
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