| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1591 |
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| Symbol | |
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| ID | 5205596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1957893 |
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| End bp | 1960457 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640599813 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001280482 |
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| Protein GI | 148653389 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0126438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000548277 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAAGTC GTCACCTCGA AGTTTCCTTG CGTCTAGCCA TGACGCTGGC CCGACAAAAG
TCACATGAGT ATTTAACCGT TGAACATTTG TTGCTGGCTT TATTAGAAAA CAATAATGCA
GTTACCACCC TTAAATCTTG CGGCGCTGAT ATCAGCAGCT TGCGCTCGGA TTTAGAAGCC
TATATCGACA AACATACACC AAAGCTTGAT GCTGATCTTG AGCAAACACC GCAAGCAACC
CAAGGCTTTG ATCGTATTTT GCAGCGCGCC ATTTTCCATG TGCAATCTAT TGGCTCAGGC
CGCCTAGTAC AAGGCTCGGA TATCTTAGTC TCTATGTTCT CAGAGCATGA TACCTATGCG
GTATATTTGC TTAAAAAACA AGGTGTGAGC CGTCTTGAGC TGACTCAATA TTTGTCACAT
GGCAATGAGG GTGATGAGAC TCGTGAAGGT CCGTCAGACA ATGAAGGCGC AGACCCTAAA
GCCGCTCGTG CCAAAAAAGA CCCACTGACT GAATTTGCGG TTAACTTAAA TAAACGGGCT
GCAGAAGGCA AAACGGATCC ACTTATTGGC CGCTCAAGTG AAATCGAGCG TACCGCACAG
GTACTTTGTC GTCGCCGCAA AAATAACCCG CTGTTAGTCG GTGATCCTGG TGTGGGTAAA
ACCTCTATTG CAGAGGGTTT GGCTTGGTTA ATTATTAACA ATAAAGCACC CAAACCTTTA
CAGGGCTGCG TGATTTATAG CCTAGATATT GGCTCATTAA TTGCTGGTAC CAAATATCGG
GGTGACTTTG AAAAGCGCAT GAAAGCTTTG CTTGATGAGC TTAAGAAAAA GCCCAATGCC
ATTTTGTTTA TTGATGAAGT GCACATGATT ATTGGTGCTG GCTCATCCAT GAGCAGTAAT
ATGGATGTGT CTAACTTAAT CAAGCCTGCA TTGGCCAATG GTGAGCTTAG ATGTATCGGA
TCAACCACCT TTACAGAGTA TCGTCAGGTG TTTGAAAAAG ATCATGCGTT ATCACGTCGC
TTCCAAAAAA TCGATGTCAA TGAGCCGAGT GTGGATGACA GCATTGAAAT CTTGCGTGGC
CTAAAATCAC GTTATGAAGA GTTTCATAAT GTGAAGTACA CAGATGCCGC TTTAGTGAGC
GCAGTTCAGC TATCAGCCAA ACACATTCAT GAGCGCTTTT TGCCAGATAA AGCCATTGAC
GTGATTGATG AGGCAGGTGC TTATAAGCGT TTGGGCGTGA CGCCAGATGC CGCTCAGGTT
GAAGAGGAAA ATCAGTTAAT TGATGAGCTC AACAGTACAG ATGTCAATGC GGTAGACTTA
AACGATGACG TTTTGGGTAA CAAGACCGAT TATGATGCCC AAATTGATGC TGATGAGAGC
GGTTTAGACG CCGAAGCTAA TGATGATAAT GATGATGACG CTTTAGAGTC GGTAGAGTCT
GACTTTGAAG ATACGGATGA GGCATTGGAT GATGAGACGC AAGCGGCACC TACAGTTATT
GATGTAGAGG ATATCGAAGC GATTATCTCC AAGCTTGCTC GTATTCCGCC AAAATCAGTG
TCTAATGATG ACAAGTCGTT GTTACAGCAC CTAGAGCGTG ATTTAAATCG CTTGGTATTT
GGCCAAGATG AAGCCATAAA AACCTTGTCA GATGCGATTA AATTGTCTCG TGCGGGTCTA
AAATCTGCAG ATAAGCCGAT TGGCTCGTTT ATGTTTGCTG GCCCTACCGG TGTGGGTAAA
ACCGAGGTGT CTAAGCAGCT GGCCAATCTG ATGGGCATCG AGCTGATACG CTTTGATATG
TCTGAGTATA TGGAAGCGCA TACCGCCTCT CGTTTAATTG GTGCGCCTCC AGGCTATGTG
GGCTTTGATC AAGGTGGTTT ACTGACTGAA AAAATCAATC AGCATCCGCA TTGTGTCTTG
CTACTCGATG AGATTGAAAA AGCGCATCCC GATGTGTTCA ACTTGCTACT GCAAGTGATG
GATCATGGCT CGCTTACGGA TAATAATGGC CGCGTTGCAA GCTTTAAGCA AGTCATCTTG
ATTATGACTA CCAACGTGGG CGCCGAGAAC ATCAGCCGCT CATCGATGGG CTTTACTAAG
CAAGATCACA GTAAAGACAA CACTGAGGCG ATGAATCGTG TGTTTACGCC AGAGTTCCGT
AACCGTCTCG ATGCCATTAT TCAGTTCAAC CCTCTAGATC CCTCTATCGT AGTATCGGTA
GTCGATAAGT TCTTAGTTGA ATTGCAAGCT CAGCTAGATG ATAAGCAAGT GATGCTAGAG
ATTGATGATG AGGTACGTGA ATACTTGGCT GAAAAAGGCT ATGATCGCTT AATGGGAGCG
CGTCCAATGC AGCGCTTGAT CCAAAATGAG ATTAAAAAGC CACTGGCCAA TATGGTACTG
TTCGGAGATT TAGCAGAAGG TGGTGCGGTG CATGTGACCT TAAGCGAGGA CGTTTTTGAC
AGTGCTCTAG ATGATGGCAG TAAGGCCGCT GCAGAAGGCA GTCGTATCTT ACTTACAGTG
GTCGAGAAGC ATGGTCAGCG CGGTGTTGAA TACGAAGAAG GCTAA
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| Protein sequence | MLSRHLEVSL RLAMTLARQK SHEYLTVEHL LLALLENNNA VTTLKSCGAD ISSLRSDLEA
YIDKHTPKLD ADLEQTPQAT QGFDRILQRA IFHVQSIGSG RLVQGSDILV SMFSEHDTYA
VYLLKKQGVS RLELTQYLSH GNEGDETREG PSDNEGADPK AARAKKDPLT EFAVNLNKRA
AEGKTDPLIG RSSEIERTAQ VLCRRRKNNP LLVGDPGVGK TSIAEGLAWL IINNKAPKPL
QGCVIYSLDI GSLIAGTKYR GDFEKRMKAL LDELKKKPNA ILFIDEVHMI IGAGSSMSSN
MDVSNLIKPA LANGELRCIG STTFTEYRQV FEKDHALSRR FQKIDVNEPS VDDSIEILRG
LKSRYEEFHN VKYTDAALVS AVQLSAKHIH ERFLPDKAID VIDEAGAYKR LGVTPDAAQV
EEENQLIDEL NSTDVNAVDL NDDVLGNKTD YDAQIDADES GLDAEANDDN DDDALESVES
DFEDTDEALD DETQAAPTVI DVEDIEAIIS KLARIPPKSV SNDDKSLLQH LERDLNRLVF
GQDEAIKTLS DAIKLSRAGL KSADKPIGSF MFAGPTGVGK TEVSKQLANL MGIELIRFDM
SEYMEAHTAS RLIGAPPGYV GFDQGGLLTE KINQHPHCVL LLDEIEKAHP DVFNLLLQVM
DHGSLTDNNG RVASFKQVIL IMTTNVGAEN ISRSSMGFTK QDHSKDNTEA MNRVFTPEFR
NRLDAIIQFN PLDPSIVVSV VDKFLVELQA QLDDKQVMLE IDDEVREYLA EKGYDRLMGA
RPMQRLIQNE IKKPLANMVL FGDLAEGGAV HVTLSEDVFD SALDDGSKAA AEGSRILLTV
VEKHGQRGVE YEEG
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