| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1549 |
|---|
| Symbol | |
|---|
| ID | 5206451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1896417 |
|---|
| End bp | 1897892 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640599767 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001280440 |
|---|
| Protein GI | 148653347 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.148844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCTC CCGAAACTGC CAGCCCCACG ATACTCTCAT CAGCCATAAA TGCTCAGGAG
CATAACGACT CAGCTAATGG TGTGGTTATT ATCGGGGCCG GTATGGCAGG CAGTCGCTTA
GCCATTAAAT TAGCCACTGT TTGGCAGCAA AATGACAGTA ACACGCACAG CAATGGCCAT
CACAGCAACA ACACTCAGGA ACATAAAGCG CCTAAAATAA CTTTAATTAG TAAAGAGTCT
GAGGTGGGTT ATAACCGTAT CATGCTATCT CCAGTCTTGG CAGGCGAGAC CTCATTTGAA
GACACCTATT TGTATGATAA AGGGGACTAT GAAAGACTAG GTATTCATGT TCTAGCGGCA
GTGGGTGTCG ATAAAATTGA TACCAATAAT CAACAGTTGT CCTTAGACAA TGGTGACTGC
CTCAGTTATG GCAAGCTGGT CATTGCGACG GGCTCAACTG CTCGGGTTAT CCCTTTTCCA
AATCACCAAG CCAAAGGCGT TCACGTATTT CGCGACGTGG CAGATGTTGA TTTGCTAAGT
GAGTATGCCA AACAAGGTAA GACAGGCTTA GTGATTGGCG GCGGCGTGCT GGGCCTAGAG
GCAGCTTGTG CCTTATCTTC GCAGGGGGCT GCTATGACGG TGATCCATGT CGATGATTAT
GTACTAAACC GTCAGTTAGA CTTGCCGGCT GCACTGATGC TGCAAGAAGA GCTGGTCAGA
CGTGGTGTTG GGCTTGAGGT GTCTGCTGCA TCGACCACCA TTGAGGTAAA CGACGCTGAT
GAAGTCGTGG GTCTAAGTCT AAAAGATGGC CGTACTTTGG CCGCTGATTT TATAGTCATG
GCCGTCGGTA TTATTCCGAA TACTCAGTTG GCAGCTGATA GTGGTATTGA GGTGAATCGA
GCCATAGTGG TAGATGAGAA CATGCACACC TGTTGTCCGA ACATCTATGC CATTGGCGAA
TGTGTCGAAA TTAATGACGA GCTTTTTGGC ATGGTATCGT CTGTCAATCA ACACGTAGAT
AGCCTAATTC AAGTGCTAAC GCACCCTGCG ATAGAATCAA ATTGGTCTCC TTTTGTCAGC
GTACCATTGG CATTAAAACT TAAGGTCTCA GGCATTGCCG TATTCTCATC AGGTCAAATT
GAATTTGATG ACGAAGAGCT GGCTGTCGTA GAGCAGATTG TTTATAGACA CATTGAGGAT
AATCAGTACC ACTGCCTATT TGTGAAGGCG GACCATTTAA TTGGGGCTGT GTTGTATGGA
GAAACTGGCG ATGGCACTTT TTACAGTAAG CTGATTAATG AGCAAATTGA TATTTCAAGC
GTTAAACAAG ATTTGATATT TGGGGCAGCT TATTGTCAAT CAAAGCTTGA AAATCAAGAC
AGTGATAATG CTGCCATCAG CCCAGTGAGC ACAGGTGAAC AGACGGCTGT CACACAGCAA
GAGACTGCCG CATTACAGAC AATCGCCTGT GCCTAA
|
|---|
| Protein sequence | MPAPETASPT ILSSAINAQE HNDSANGVVI IGAGMAGSRL AIKLATVWQQ NDSNTHSNGH
HSNNTQEHKA PKITLISKES EVGYNRIMLS PVLAGETSFE DTYLYDKGDY ERLGIHVLAA
VGVDKIDTNN QQLSLDNGDC LSYGKLVIAT GSTARVIPFP NHQAKGVHVF RDVADVDLLS
EYAKQGKTGL VIGGGVLGLE AACALSSQGA AMTVIHVDDY VLNRQLDLPA ALMLQEELVR
RGVGLEVSAA STTIEVNDAD EVVGLSLKDG RTLAADFIVM AVGIIPNTQL AADSGIEVNR
AIVVDENMHT CCPNIYAIGE CVEINDELFG MVSSVNQHVD SLIQVLTHPA IESNWSPFVS
VPLALKLKVS GIAVFSSGQI EFDDEELAVV EQIVYRHIED NQYHCLFVKA DHLIGAVLYG
ETGDGTFYSK LINEQIDISS VKQDLIFGAA YCQSKLENQD SDNAAISPVS TGEQTAVTQQ
ETAALQTIAC A
|
|---|
| |