Gene PsycPRwf_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1528 
Symbol 
ID5206358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1868850 
End bp1869761 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content50% 
IMG OID640599746 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001280419 
Protein GI148653326 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTA ACGTACTTCC CGAAGATATC GAGCTTGCCG CAGCGCCCCC CTCCTCATGG 
CGGCTGTTTG TCGCAACGTT TTGTCGCAAC CGAGGCGCCG TGCTTGGCCT ACTGGTATTA
GTGCTCATGG TCATAGTGGC ACTGCTTGCG CCCAGCATTG CACCACATGA CCCTTACGAG
CTATTTACAG GAAAAGAGCA GCTCCCACCG TCGTTTATGA GTGGCGGCGA TGCCATGTTC
TTTTTAGGCA CCGATGATGC CGGCCGTGAT ACCTTGTCTC GGGTGATGTA TGGCGCTCGC
TATTCATTAT TTATCGGCCT CAGTGCCACA ACTTTGGCCA TGATTACTGG CATCAGCCTA
GGCCTTAGCG CCGCCTTTTG GCCCAAAGTT TGGGGTAAGG CTGTGATGCT TGTTAACGAT
ATTTTGATGT CGTATCCAAG CTTATTATTG GCTATTATCA TTGCGGCCAT TTTAGGTCCA
AACATGACCA ATACCATCAT CACCATTGCC TTGGTGTGTA CCCCGCCTTT TATTCGTTTG
ACCCGAGCCA CTGCCATGGT CGAATTGCAA CGAGAATACT TCACAGCCTC TAAGGTGATG
GGCGCTGGCG TACTTAGGCT ATTATTTATC ACGATTTTGC CTAATTGTAT GGCGCCGCTT
ATTGTGCAGG CCACCATGAT ATTCTCCTCA GCCATTTTAG AAGCTGGCGC AATTGGATTT
TTGGGCTTTG GCGTACAGCC GCCAGACGCA GAATGGGGTG CAATGCTGGG TACCGCTCGT
CAATACATTC AAAGCAATGT GTGGCTTGCC ATTTGGCCCG GTTTGGCTAT TTTCTTAGCC
GCTTTATCTA TTAACTTAAC CGGAGATGGG CTACGTGATG CTCTTGATCC TAAACTAAAG
CAGGTGAGCT AA
 
Protein sequence
MKTNVLPEDI ELAAAPPSSW RLFVATFCRN RGAVLGLLVL VLMVIVALLA PSIAPHDPYE 
LFTGKEQLPP SFMSGGDAMF FLGTDDAGRD TLSRVMYGAR YSLFIGLSAT TLAMITGISL
GLSAAFWPKV WGKAVMLVND ILMSYPSLLL AIIIAAILGP NMTNTIITIA LVCTPPFIRL
TRATAMVELQ REYFTASKVM GAGVLRLLFI TILPNCMAPL IVQATMIFSS AILEAGAIGF
LGFGVQPPDA EWGAMLGTAR QYIQSNVWLA IWPGLAIFLA ALSINLTGDG LRDALDPKLK
QVS