Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1528 |
Symbol | |
ID | 5206358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1868850 |
End bp | 1869761 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640599746 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001280419 |
Protein GI | 148653326 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTA ACGTACTTCC CGAAGATATC GAGCTTGCCG CAGCGCCCCC CTCCTCATGG CGGCTGTTTG TCGCAACGTT TTGTCGCAAC CGAGGCGCCG TGCTTGGCCT ACTGGTATTA GTGCTCATGG TCATAGTGGC ACTGCTTGCG CCCAGCATTG CACCACATGA CCCTTACGAG CTATTTACAG GAAAAGAGCA GCTCCCACCG TCGTTTATGA GTGGCGGCGA TGCCATGTTC TTTTTAGGCA CCGATGATGC CGGCCGTGAT ACCTTGTCTC GGGTGATGTA TGGCGCTCGC TATTCATTAT TTATCGGCCT CAGTGCCACA ACTTTGGCCA TGATTACTGG CATCAGCCTA GGCCTTAGCG CCGCCTTTTG GCCCAAAGTT TGGGGTAAGG CTGTGATGCT TGTTAACGAT ATTTTGATGT CGTATCCAAG CTTATTATTG GCTATTATCA TTGCGGCCAT TTTAGGTCCA AACATGACCA ATACCATCAT CACCATTGCC TTGGTGTGTA CCCCGCCTTT TATTCGTTTG ACCCGAGCCA CTGCCATGGT CGAATTGCAA CGAGAATACT TCACAGCCTC TAAGGTGATG GGCGCTGGCG TACTTAGGCT ATTATTTATC ACGATTTTGC CTAATTGTAT GGCGCCGCTT ATTGTGCAGG CCACCATGAT ATTCTCCTCA GCCATTTTAG AAGCTGGCGC AATTGGATTT TTGGGCTTTG GCGTACAGCC GCCAGACGCA GAATGGGGTG CAATGCTGGG TACCGCTCGT CAATACATTC AAAGCAATGT GTGGCTTGCC ATTTGGCCCG GTTTGGCTAT TTTCTTAGCC GCTTTATCTA TTAACTTAAC CGGAGATGGG CTACGTGATG CTCTTGATCC TAAACTAAAG CAGGTGAGCT AA
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Protein sequence | MKTNVLPEDI ELAAAPPSSW RLFVATFCRN RGAVLGLLVL VLMVIVALLA PSIAPHDPYE LFTGKEQLPP SFMSGGDAMF FLGTDDAGRD TLSRVMYGAR YSLFIGLSAT TLAMITGISL GLSAAFWPKV WGKAVMLVND ILMSYPSLLL AIIIAAILGP NMTNTIITIA LVCTPPFIRL TRATAMVELQ REYFTASKVM GAGVLRLLFI TILPNCMAPL IVQATMIFSS AILEAGAIGF LGFGVQPPDA EWGAMLGTAR QYIQSNVWLA IWPGLAIFLA ALSINLTGDG LRDALDPKLK QVS
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