Gene PsycPRwf_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1518 
Symbol 
ID5206270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1853321 
End bp1854412 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID640599738 
Producthypothetical protein 
Protein accessionYP_001280411 
Protein GI148653318 
COG category[S] Function unknown 
COG ID[COG3949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.913415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTT CAGTAATCAG GGCCATTAGC TACGCAGGGG TTTACGTCGG GGCAGTCATT 
GGCGCAGGCT ATGCCAGTGG TCAAGAAGTG ATGCAGTTTT TTGCCGGTTA TGGCTTAGTG
GGTATCATTG GTGCCATTAT TACCACGTTG TTATTTATTT GGTACGGCTC AGTATTTATG
GAGCTGGGCA ACCGATTGCA GACCTGCAGT CATCGCGATG TATTGAACTA CTTATGTGGT
AATAAGCTTG GCTTTTTAGG GGACTATGTC CTGCTGTTTT TTATGTTCGG CTGCGTCAGC
ATTATGTTCT CAGGCGGCGG GGCGGCCATT CATGAATATT GGGGATTGTC TGTGACGACC
GGTAAGCTGA TTATCGCAGC CATGACTTTA GCTACCGTAA TATTCGGCTT CTCCTCTTCG
GTGCGCGCAC TCGGTATCGT CTCGCCCATT ATTATCTTTA GCGTGATAGC CATCTCAATC
ATGACCCTAA GCACTCACTA TGACCAGCTG GGTACGGTTG ATGAGAGCCT AAAAAGCCTG
ACCCCTACTT TGGCAACCCC AGTCTGGTGG ACCTCGGCCA TCGTCTATGT GTCCTATAAC
GTCAGCTTGG CCACATCTAC TTTAACGGCG ATGGGCGGTA AAGAATCCAA TCTAAAAACC
CTACGCAGCG CTGGTATATT AGGTGGGTTT TCACTAGGGC TATGTTTGTT ATTCATCACC
GTCGCCTTGC TGTCAGACTT GAGTAATGTG ATTGAATATC AGATTCCTTT TTTACAAATT
GCCACCAATA TCAGCCCTCT AATTGGTATC TTGTTTAGTG TGGTTTTGGT CATTGCTATC
TTTACCACAG CGGTTACCAA CTTATACGGC TGCGTAATCC GTTTTTATGA CTCTCATAAA
AATCCCACTC AGTTTCGCAC CTTGACCGTA AGTTTAGTGG CTCTGTCGCT ACTGGCTTCC
CTATTCCCTT TTAGCACTTT AATTAACGTG CTATATCCAG CCTTAGGCTT ACTGGGCATG
GTGATTATGG TATGTGCGCT ATACAAAACC TTCACCGGTC AAGTCTTCTT AAAAGATGAT
GCCAAGCTAT AA
 
Protein sequence
MSSSVIRAIS YAGVYVGAVI GAGYASGQEV MQFFAGYGLV GIIGAIITTL LFIWYGSVFM 
ELGNRLQTCS HRDVLNYLCG NKLGFLGDYV LLFFMFGCVS IMFSGGGAAI HEYWGLSVTT
GKLIIAAMTL ATVIFGFSSS VRALGIVSPI IIFSVIAISI MTLSTHYDQL GTVDESLKSL
TPTLATPVWW TSAIVYVSYN VSLATSTLTA MGGKESNLKT LRSAGILGGF SLGLCLLFIT
VALLSDLSNV IEYQIPFLQI ATNISPLIGI LFSVVLVIAI FTTAVTNLYG CVIRFYDSHK
NPTQFRTLTV SLVALSLLAS LFPFSTLINV LYPALGLLGM VIMVCALYKT FTGQVFLKDD
AKL