Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1518 |
Symbol | |
ID | 5206270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1853321 |
End bp | 1854412 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599738 |
Product | hypothetical protein |
Protein accession | YP_001280411 |
Protein GI | 148653318 |
COG category | [S] Function unknown |
COG ID | [COG3949] Uncharacterized membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.913415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGTT CAGTAATCAG GGCCATTAGC TACGCAGGGG TTTACGTCGG GGCAGTCATT GGCGCAGGCT ATGCCAGTGG TCAAGAAGTG ATGCAGTTTT TTGCCGGTTA TGGCTTAGTG GGTATCATTG GTGCCATTAT TACCACGTTG TTATTTATTT GGTACGGCTC AGTATTTATG GAGCTGGGCA ACCGATTGCA GACCTGCAGT CATCGCGATG TATTGAACTA CTTATGTGGT AATAAGCTTG GCTTTTTAGG GGACTATGTC CTGCTGTTTT TTATGTTCGG CTGCGTCAGC ATTATGTTCT CAGGCGGCGG GGCGGCCATT CATGAATATT GGGGATTGTC TGTGACGACC GGTAAGCTGA TTATCGCAGC CATGACTTTA GCTACCGTAA TATTCGGCTT CTCCTCTTCG GTGCGCGCAC TCGGTATCGT CTCGCCCATT ATTATCTTTA GCGTGATAGC CATCTCAATC ATGACCCTAA GCACTCACTA TGACCAGCTG GGTACGGTTG ATGAGAGCCT AAAAAGCCTG ACCCCTACTT TGGCAACCCC AGTCTGGTGG ACCTCGGCCA TCGTCTATGT GTCCTATAAC GTCAGCTTGG CCACATCTAC TTTAACGGCG ATGGGCGGTA AAGAATCCAA TCTAAAAACC CTACGCAGCG CTGGTATATT AGGTGGGTTT TCACTAGGGC TATGTTTGTT ATTCATCACC GTCGCCTTGC TGTCAGACTT GAGTAATGTG ATTGAATATC AGATTCCTTT TTTACAAATT GCCACCAATA TCAGCCCTCT AATTGGTATC TTGTTTAGTG TGGTTTTGGT CATTGCTATC TTTACCACAG CGGTTACCAA CTTATACGGC TGCGTAATCC GTTTTTATGA CTCTCATAAA AATCCCACTC AGTTTCGCAC CTTGACCGTA AGTTTAGTGG CTCTGTCGCT ACTGGCTTCC CTATTCCCTT TTAGCACTTT AATTAACGTG CTATATCCAG CCTTAGGCTT ACTGGGCATG GTGATTATGG TATGTGCGCT ATACAAAACC TTCACCGGTC AAGTCTTCTT AAAAGATGAT GCCAAGCTAT AA
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Protein sequence | MSSSVIRAIS YAGVYVGAVI GAGYASGQEV MQFFAGYGLV GIIGAIITTL LFIWYGSVFM ELGNRLQTCS HRDVLNYLCG NKLGFLGDYV LLFFMFGCVS IMFSGGGAAI HEYWGLSVTT GKLIIAAMTL ATVIFGFSSS VRALGIVSPI IIFSVIAISI MTLSTHYDQL GTVDESLKSL TPTLATPVWW TSAIVYVSYN VSLATSTLTA MGGKESNLKT LRSAGILGGF SLGLCLLFIT VALLSDLSNV IEYQIPFLQI ATNISPLIGI LFSVVLVIAI FTTAVTNLYG CVIRFYDSHK NPTQFRTLTV SLVALSLLAS LFPFSTLINV LYPALGLLGM VIMVCALYKT FTGQVFLKDD AKL
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