Gene PsycPRwf_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1417 
Symbol 
ID5206638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1740305 
End bp1741069 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content45% 
IMG OID640599635 
ProductABC transporter related 
Protein accessionYP_001280312 
Protein GI148653219 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.819909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA TGAGCGATAT GATTGTTCTA AATCAAGTGT ATAAAAAATT CCAGACACAA 
AAAGATGGCC AAACTCAGTG GTTTACTGCT GTCGAGCCCA TATCTTTAAC TGTAAAGCAG
GGAGAGATAT TTGGGTTAAT GGGGTATTCC GGGGCAGGTA AATCCACCTT ATTACGCTTA
ATGAACTTGC TGGAGCGGCC TGATGGTGGC ACGGTAACTA TCGATGGTGA TGTACTGACG
GATATGAATC CAAAGCAGCT GCGAGTAGCC CGTCATAATG TGGGTATGAT TTTTCAGCAG
TTTAATCTGA TGTCTAACCG AACTGTTTTT GAAAACGTCG CTTTTAATCT TAAAGTATCC
GGCTACGCCA AAAATAATAT CTATCAGCGG GTGATGGAGT GTCTTGAGAT TGTCAATCTA
ACCGATAGAG CCAATCACTA TCCTGCCCAG CTGTCCGGTG GTCAAAAGCA GCGTGTGGGT
ATTGCCCGTG CTATTGCCCC AAACCCTAAA GTATTATTGG CAGATGAGCC AACCAGTGCG
TTAGATCCTT CCACCACTCG TGCATTATTG GCCACTTTAC AAGAGGTTAA TGAGAAGCTT
GGGGTGACCA TTGTGATTGT GACCCATGAG ATGAGCGTGA TTCGCCGTAT ATGTAATCGA
GCCGCTTTGT TGCATGAGGG CCACTTATTG GAAGTGGCGG ATATTATCGA TGGTCAAATT
ATCGCCAACA CTGAAGTGGG CCGCGGATTG GTTCAGGAGG ACTAG
 
Protein sequence
MTAMSDMIVL NQVYKKFQTQ KDGQTQWFTA VEPISLTVKQ GEIFGLMGYS GAGKSTLLRL 
MNLLERPDGG TVTIDGDVLT DMNPKQLRVA RHNVGMIFQQ FNLMSNRTVF ENVAFNLKVS
GYAKNNIYQR VMECLEIVNL TDRANHYPAQ LSGGQKQRVG IARAIAPNPK VLLADEPTSA
LDPSTTRALL ATLQEVNEKL GVTIVIVTHE MSVIRRICNR AALLHEGHLL EVADIIDGQI
IANTEVGRGL VQED