Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1417 |
Symbol | |
ID | 5206638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1740305 |
End bp | 1741069 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640599635 |
Product | ABC transporter related |
Protein accession | YP_001280312 |
Protein GI | 148653219 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.819909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCA TGAGCGATAT GATTGTTCTA AATCAAGTGT ATAAAAAATT CCAGACACAA AAAGATGGCC AAACTCAGTG GTTTACTGCT GTCGAGCCCA TATCTTTAAC TGTAAAGCAG GGAGAGATAT TTGGGTTAAT GGGGTATTCC GGGGCAGGTA AATCCACCTT ATTACGCTTA ATGAACTTGC TGGAGCGGCC TGATGGTGGC ACGGTAACTA TCGATGGTGA TGTACTGACG GATATGAATC CAAAGCAGCT GCGAGTAGCC CGTCATAATG TGGGTATGAT TTTTCAGCAG TTTAATCTGA TGTCTAACCG AACTGTTTTT GAAAACGTCG CTTTTAATCT TAAAGTATCC GGCTACGCCA AAAATAATAT CTATCAGCGG GTGATGGAGT GTCTTGAGAT TGTCAATCTA ACCGATAGAG CCAATCACTA TCCTGCCCAG CTGTCCGGTG GTCAAAAGCA GCGTGTGGGT ATTGCCCGTG CTATTGCCCC AAACCCTAAA GTATTATTGG CAGATGAGCC AACCAGTGCG TTAGATCCTT CCACCACTCG TGCATTATTG GCCACTTTAC AAGAGGTTAA TGAGAAGCTT GGGGTGACCA TTGTGATTGT GACCCATGAG ATGAGCGTGA TTCGCCGTAT ATGTAATCGA GCCGCTTTGT TGCATGAGGG CCACTTATTG GAAGTGGCGG ATATTATCGA TGGTCAAATT ATCGCCAACA CTGAAGTGGG CCGCGGATTG GTTCAGGAGG ACTAG
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Protein sequence | MTAMSDMIVL NQVYKKFQTQ KDGQTQWFTA VEPISLTVKQ GEIFGLMGYS GAGKSTLLRL MNLLERPDGG TVTIDGDVLT DMNPKQLRVA RHNVGMIFQQ FNLMSNRTVF ENVAFNLKVS GYAKNNIYQR VMECLEIVNL TDRANHYPAQ LSGGQKQRVG IARAIAPNPK VLLADEPTSA LDPSTTRALL ATLQEVNEKL GVTIVIVTHE MSVIRRICNR AALLHEGHLL EVADIIDGQI IANTEVGRGL VQED
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