| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1409 |
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| Symbol | |
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| ID | 5206336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1731126 |
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| End bp | 1732163 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599627 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001280304 |
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| Protein GI | 148653211 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.327353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA CTGCTTCAAA AAACCGGCTA AACCCTATTT GGCAAGCACG CCTTAACCGC
TTCAAAAAAA ATAGACTCGG CGTCTTGGCG CTGGCCCTGT TTTGCATACT GTTTGCTGTG
TGTATGGGGG CAAATGTCGT GGCCAATGAT AAACCTTTGC TGGTCAAATA CGGCGGCGAG
TTGTATGTGC CTATTGTTAA AGCTTATCCT GAAACTACCT TTGGCGGAGT GTTTGAAACC
GAGGCAGATT ATAAAGATCC TGCGGTTAAG CACATGATTG AGCAAAACGG TTTTATGATT
ATGCCGCCTA TTGAATTTGC CGATCAGACG CCAAGCGTGG AGATTGCCAT GCCGTATCCG
GCACCGCCCA ATACCAGTAA TTGGCTTGGC ACTGATGACA CCGGCCGAGA TGTATTGGCG
CGTATCTTGT ACGGCATGCG CATTTCGTTA TTATTTGGGT TGGCATTAAC CTTGGCCGGA
TCTGTGATCG GTATCGTGGT GGGCGCCATC CAAGGCTATT TTGGGGGCTG GCCAGATTTG
ATAGGTCAGC GCTTTATGGA AGTATGGGCA GGCTTGCCGC AGCTGTTTAT GATTATTATT
TTGGTAAGCT TATTTAGCCC CAGTGTCTGG GTACTGTTTG GGCTTATGCT ACTGTTTGGC
TGGATGAGCT TGGTGGGACT GGTACGGGCA GAGTTTTTGC GGGCGCGTAA CTTTGATTAT
GTGCGTGCAG CGCATAATTT AGGGGTATCA GATTGGCAAA TTATGCGGCG CCATATCCTG
CCCAATGCAC TGGCTTCAAG CTTATCGCAG TTGCCCTTTA TTTTGACTGC TAATATCGTG
GCCTTAACCT CACTGGATTT CTTAGGTTAT GGTCTACCAC CAGGCTCACC GTCATTGGGG
GAGCTGATGA ACCAAGGTAA AAATAACTTA GATGCGCCTT GGCTGGCATT GTCGGCGTTT
TTTAGCCTGA CTGTGGTGCT GTCTTTATTG ATCTTTATTG GTGAAGCATT GCGAGATGCC
TTTGACCCCA GACGTTAA
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| Protein sequence | MAQTASKNRL NPIWQARLNR FKKNRLGVLA LALFCILFAV CMGANVVAND KPLLVKYGGE
LYVPIVKAYP ETTFGGVFET EADYKDPAVK HMIEQNGFMI MPPIEFADQT PSVEIAMPYP
APPNTSNWLG TDDTGRDVLA RILYGMRISL LFGLALTLAG SVIGIVVGAI QGYFGGWPDL
IGQRFMEVWA GLPQLFMIII LVSLFSPSVW VLFGLMLLFG WMSLVGLVRA EFLRARNFDY
VRAAHNLGVS DWQIMRRHIL PNALASSLSQ LPFILTANIV ALTSLDFLGY GLPPGSPSLG
ELMNQGKNNL DAPWLALSAF FSLTVVLSLL IFIGEALRDA FDPRR
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