| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1403 |
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| Symbol | |
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| ID | 5206789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1722528 |
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| End bp | 1724213 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599621 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001280298 |
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| Protein GI | 148653205 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.726768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00639423 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATTA AAGCCCCCGA TCTAGGTGTG GATAGTGCCG AAGTAAGCGA GATTATGGTC
TCGGTCGGCG ATGTCATTAC AGAAAATGAT AATATTGTCT TATTAGAGTC AGACAAAGCT
GCGGTAGAAG TGCCCAGCTC AGCCAGTGGT ACTGTGACTA AGATTGTGGT GTCACTTGGT
GATACGGTTA GCGAAGGCTC AGTACTTATT GAGATTGAAG CAGACGCTGC ACAGACAGAC
TCACAGCCTA AAGCTGAGCC AGAAGCTGAA GCTGAGCCTG AGCAAGCACC ACAAGAAGCA
TCACAGCCTG AAGCTCAAAC TCAAACACAA GCAGCAGATA AGCCGGCTGC TGCCACTTCT
CAGACCTATC CGCTACCAGA CCTGGGTGTG GATGAAGCTG AGATTGCTGA GATTATGGTC
AGCGTCGGTG ATAGCGTAGA AGCTGAGCAG TCTTTATTAT TGGTAGAATC AGACAAAGCC
TCTGTTGAAG TACCATCGCC AGTATCCGGC GTTGTCGAGA AGATTTTGGT GGCCGCTGGT
GATAAAGTAG CCAACGGTCA AGATTTTATT GTCATTAAGG CAGCAGGTGC GCCAGAAGCT
GCTGCAAGCG CCGCGCCGGC TAAGTCAGAA AGCGAGTCGA ATAAAGCGCT GCCTCAAGCA
CAAGATAAGC CTGAGAGCGC CAAGCAAGCC GCACCAAAAC CAACAGCGCA AAATCAAAGT
CAGGCACCAG CGAAGCTTAG TGAGCAGCAA GTCAATGCCA AGCTTACCGA TGTCTATGCA
GGACCTGCGG TGCGTAAGCT TGCGCGTCAG CTAGGCGTAG ATATCACTCA AGTAGAGGGC
ACAGCGCTTA ATGCACGCAT CTTAAAAGAA GATGTGTTTG ATTACGTAAA AGCCCATATG
CAAACGGGCT CTGCCGCTGC ATCTACTGGT GCTGTAGTCA GCTCAGGTCT GCCAAGTTTA
CCAGACATGA GTAAGACAGA TATCTGGGGT GAGATTGAGA CCCAAGACTT AAGTCGCCTG
CAAAAAGTGT CTATACCGCA GCTAAATTAC AACACTTATT TGCCGCAGGT GACTCAGTTT
GACTTATCTG ATATTACTGA GACTGAGAAA CTGCGTGGTG AGTTAAAAGG TGAATTTAAG
GCGCAAGGCA TTGGCTTAAC AATCCTAGCT TTCATCGTCA AAGCCACCGC CTACGCATTG
ATGCAGCATC CTAAGTTCAA CAGTCACCTA AGTGATGATA ATACTCAAAT TCATATTAGA
AAAACGGTGA ATATGGGTAT TGCGGTTGCG ACAGATGATG GTTTGATTGT GCCGGTCATT
AAAGATGCTC AAGACAAAGG CATTAAACAG ATCGCCATCG AAATTGGTGA GCTGGCTGCC
AAAGCGCGTG ATAAGAAGTT GGGTGCCAAA GACTTACAAG GTGCAAGCTT TACTATCTCA
AGTCAAGGTA ACCTAGGCGG TACTTACTTT ACGCCGCTGG TCAACTGGCC ACAAGTGGGC
ATCTTAGGGG TTTCTGAAGC GACCATGCAG CCTCGCTGGA ATGAAAAAAC ACAAAACTTT
GAGCCACGCT TAATGCTGCC GCTGTCTTTG TCGTATGATC ACCGCGTTAT TAATGGTGCA
GATGCCGCTG TATTTACCCG CTACATTGCT AAGCTGTTGG CAGACCCAAG ACGTATTTTG
CTATAG
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| Protein sequence | MEIKAPDLGV DSAEVSEIMV SVGDVITEND NIVLLESDKA AVEVPSSASG TVTKIVVSLG
DTVSEGSVLI EIEADAAQTD SQPKAEPEAE AEPEQAPQEA SQPEAQTQTQ AADKPAAATS
QTYPLPDLGV DEAEIAEIMV SVGDSVEAEQ SLLLVESDKA SVEVPSPVSG VVEKILVAAG
DKVANGQDFI VIKAAGAPEA AASAAPAKSE SESNKALPQA QDKPESAKQA APKPTAQNQS
QAPAKLSEQQ VNAKLTDVYA GPAVRKLARQ LGVDITQVEG TALNARILKE DVFDYVKAHM
QTGSAAASTG AVVSSGLPSL PDMSKTDIWG EIETQDLSRL QKVSIPQLNY NTYLPQVTQF
DLSDITETEK LRGELKGEFK AQGIGLTILA FIVKATAYAL MQHPKFNSHL SDDNTQIHIR
KTVNMGIAVA TDDGLIVPVI KDAQDKGIKQ IAIEIGELAA KARDKKLGAK DLQGASFTIS
SQGNLGGTYF TPLVNWPQVG ILGVSEATMQ PRWNEKTQNF EPRLMLPLSL SYDHRVINGA
DAAVFTRYIA KLLADPRRIL L
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