| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1393 |
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| Symbol | |
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| ID | 5206690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1709589 |
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| End bp | 1710416 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599611 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001280288 |
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| Protein GI | 148653195 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000191826 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTTAG TATCTGACTT AGCCCTCCCT AAGCCAAAAG TACATATTGT AATTCCAGCC
CGCTTTAAGA GCACCCGTTT GCCCGGTAAG CCGCTATTAG AGATTCATGG TAAACCTATG
ATTCTTTGGG TGGCACAAAA AGCCAGTCAA GCTACCTTTG CGGATGACTT GTGTATTGCC
ACTGATGATG AGCGCATTGC AGCAGTATGC CAGCAAGCTG GTTATGAGGT AGTGATGACC
GATGCCCATC ATGCCTCAGG TACCGATAGA CTCAGTGAGG TGGCACAAAA AAAAGGCTGG
GACGCAGAGG ATATCGTGGT CAATATGCAA GGTGATGAGC CTTTGGTGCC GCCACAGCTA
TTAGAGCAGG TCAAAGACTT GTTAGTAAAT AAACCCGATT GCGTGATGGC CACCTTATAT
GAGCTTATCT TGGATTATCA AGAATTCATA CGTCCTTCGG TCGTCAAAGT GGTGACTGAT
AACTTAAAGC ATGCCCTATA CTTTAGTCGT GCGCCTATCC CTTGTGATAG AGATCATGCG
ATGGCGATGG TGCAGCAGCC TGAGGGATCG CATCAGCCAC CGCTGACAGT GCCTAAGCAG
GCTTACCGTC ATCTAGGTAT CTATGCGTAT CGTGTAAAAC TACTGCAAGA CTTTGTGCGC
TGGTCGCCGG GCATCTTGGA GAATTTAGAG AGCTTAGAGC AACTTCGGGT GCTTGAAAAT
GGAGGCAAAA TTGCCATCGA AGCTGCCTCG GTTCAGCTGC CGCCAGGAGT AGATCTGCAA
GAGGATTTAG ACCGTCTTAA CGCATTGCCG ATTAGCGAGC TACAGTAA
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| Protein sequence | MTLVSDLALP KPKVHIVIPA RFKSTRLPGK PLLEIHGKPM ILWVAQKASQ ATFADDLCIA
TDDERIAAVC QQAGYEVVMT DAHHASGTDR LSEVAQKKGW DAEDIVVNMQ GDEPLVPPQL
LEQVKDLLVN KPDCVMATLY ELILDYQEFI RPSVVKVVTD NLKHALYFSR APIPCDRDHA
MAMVQQPEGS HQPPLTVPKQ AYRHLGIYAY RVKLLQDFVR WSPGILENLE SLEQLRVLEN
GGKIAIEAAS VQLPPGVDLQ EDLDRLNALP ISELQ
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