| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1238 |
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| Symbol | |
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| ID | 5205246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1524754 |
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| End bp | 1526418 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640599457 |
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| Product | BCCT transporter |
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| Protein accession | YP_001280135 |
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| Protein GI | 148653042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.332872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA TAGAGATGAC ACCTGCCACT GAGCCAAATA TGAGCTCAAA CGTACACAAA
ACACCGCAGC CTCATTTAGA GTCGAAAGAT GCGCTGGGCC TGAAAAACCC AGCCCTATGG
TATAGCGGTG GTTTTATTAT TATATTCGTA TTGATGGCTA TTTTTAGTCA GCAGTATTTA
GCTCAAGCAG TTGAAATAGG CTTTAATTGG TCAGTGAAGT TTTTTGGTCC TTTTTGGCAG
ATACTGTTGC TGGCTACTTT CTTAATTGCT TTAGCCGTGG GTGCGGGTCG CACTGGCCGA
GTTATCTTAG GAAACTTAGC ACAGCCTGAA ATGGATAGCT TTAAATGGAT GGCTATCTTA
TTTTGTACAT TGCTGGCAGG TGGCGGTGTT TTCTGGGCAG CAGCTGAGCC TATGGCACAT
TTTGTCACGC CGCCGCCAAT ATTTGCAGAG ACGGCTGATA TCCAGCAAAG AGCTTTCAAT
GCATTATCAC AATCTTTTAT GCATTGGGGG TTTTTAGCGT GGGCGATTGT GGGTAGCTTA
TCTGCTATTG TTATTATGCA CTTGCATTAC GACAAAGGAT TACCATTAAA GCCTCGTACT
TTTCTGTATC CAGTATTGGG AGAGCGTGTT TTAACCGGTC ATACAGGTGC CATTATCGAT
GCCTGCTGTA TTATTGCTGT AGCAGCAGGA ACAATTGGTC CCATTGGCTT TTTAGGGTTA
CAAATCAGTT ATGCCCTAAA CACACTGTTT GGTATTCCAG ATACCTTCAT CACCCAGCTT
ATCATTATTT TGTTCGCCAT TGCTTTATAT ACCTTATCAG CCATCAGTGG CCTTGCTAGA
GGTATGCAGC TGCTTAGCCG TTTTAACGTT ATCTTAGCAT TTGCATTGAT GCTTTTTATC
TTAGTATTTG GTCCAAGTAA TTTTATTGTC AATGGTTATA TTCAAAGTAT GGGTAGTATG
GTTAATAACT TTCTGCCTAT GGCGACCTTC CGAGGTGATG AGGGATGGTT GAGCTGGTGG
ACCGTATTTT TCTGGGGCTG GTTCTTAGGT TATGGTCCTA TGATGGCCAT CTTTATCGCT
CGTATTTCAC GTGGTCGCAC CATTCGCCAG CTAATCACGA CAGTTTGTAT TGTAGCGCCT
TTAGTGACCT GCTTTTGGTT TACTATTGTT GGCGGAACAG GGCTTGCGTT TGAAATTGCG
AACCCAGGTA GCGTGAGCGC AGCATTTGAA GGGTTTAACT TGCCGGGGGC TTTATTAGCC
ATTACTCAGC AGTTACCGTT TCCTATGGTT ACCTCAATCT TATTCTTAAT TTTAATGACC
ATTTTCATTG TGACGACAGG TGACTCTATG ACTTATACCA TCAGTGTGGT GATTAGTGGT
GAGCGAGAGC CAAATGCCAT TATCCGCACG TTTTGGGGGG TCATGATGGG GGTCACTGCA
ATTGCACTCA TTTCTATCGG CGCAGGCGGC GTGACAGCAC TACAGTCATT TATTGTGATT
ACCGCCGTAC CTGTTTCTTT TATTATGCTG CCAGCATTAT GGAATGGCCC TCAAATAGCG
AAGCAAATGG CAAAAGATCA AGACTTGTAT CGCCCCAATC GTTTATTAAC TGGGCAGCCT
ATAGTTCAAG CTGCTGTTAA ATCGGATGTG ATAGCTAAAA GATGA
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| Protein sequence | MTDIEMTPAT EPNMSSNVHK TPQPHLESKD ALGLKNPALW YSGGFIIIFV LMAIFSQQYL
AQAVEIGFNW SVKFFGPFWQ ILLLATFLIA LAVGAGRTGR VILGNLAQPE MDSFKWMAIL
FCTLLAGGGV FWAAAEPMAH FVTPPPIFAE TADIQQRAFN ALSQSFMHWG FLAWAIVGSL
SAIVIMHLHY DKGLPLKPRT FLYPVLGERV LTGHTGAIID ACCIIAVAAG TIGPIGFLGL
QISYALNTLF GIPDTFITQL IIILFAIALY TLSAISGLAR GMQLLSRFNV ILAFALMLFI
LVFGPSNFIV NGYIQSMGSM VNNFLPMATF RGDEGWLSWW TVFFWGWFLG YGPMMAIFIA
RISRGRTIRQ LITTVCIVAP LVTCFWFTIV GGTGLAFEIA NPGSVSAAFE GFNLPGALLA
ITQQLPFPMV TSILFLILMT IFIVTTGDSM TYTISVVISG EREPNAIIRT FWGVMMGVTA
IALISIGAGG VTALQSFIVI TAVPVSFIML PALWNGPQIA KQMAKDQDLY RPNRLLTGQP
IVQAAVKSDV IAKR
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