| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0981 |
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| Symbol | |
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| ID | 5206188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1166995 |
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| End bp | 1167924 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599200 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001279881 |
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| Protein GI | 148652788 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000156201 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTATGG CAACAACGGA AGGCAAGCTT TGGCTAAACG GTGAAATGGT CAATCAGCCT
GATGCCAAAG TGCATGTGTT AACGCACAGT TTGCATTATG GTATGGCAGT ATTTGAAGGG
GTGCGTGCTT ATCAAACAGA AGATGGCCGT ACTGCAATCT TTAGATTAGA AGATCACACC
GATCGCCTAA TGGGCTCTGC CAAAATCTTT CAATTAAATG TCCCCTTTGA TAAAGCCACT
TTGAATCAAG CCCAAAAAGA GGTCGTTAAA CAAAATGGCT TTGAGTCGGC CTATATTCGT
CCGCTTATCT GGGTGGGCGC TGAAAAACTA GGACTCTCCT CACGAGATAA TAGTATCAAT
GCCATGGTTG CCGCTTGGAA ATGGGGCGCT TATTTGGGCG AGGAGGGCAT CCAAAAAGGA
ATCCGGGTGA AAACCTCATC CTATACCCAC CATATGACCA ACGTCACCAT GTGTAAGGCC
AAAGCAGCGA GCAACTATCC AGTGTCTATT ATGGCCAACC AAGAGGTGAC TCGCAACGGC
TATGACGAAG CCATCTTGAT GGACTCTCAA GGCTATGTGT GCCAAGGTTC AGGCGAAAAC
TTATTTATGG TAAAAAATGG CGAGCTACAT ACGCCAGATT TGGCAGGTGG GGCATTAGAT
GGGATTACCC GCCGTACGAT GATTCAGTTC GCTGAGGATT TAGGCATTAA AGTGGTCGAA
CGCCGTATTA CTCGCGATGA GTTTTATTTA GCCGATGAGG TGTTTATGAC CGGTACTGCC
GCTGAAGTGA CGCCCATCCG TGAATACGAT GATCGCACCA TTGGTAATGG CGGACGCGGT
GACATCACAC AGAAGCTGCA GAGCTTATAT TTTGATGTGG TACATGGCCG CAATGAGCAG
TACATGGATT GGCTGAGCTT TGTTGATTAG
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| Protein sequence | MSMATTEGKL WLNGEMVNQP DAKVHVLTHS LHYGMAVFEG VRAYQTEDGR TAIFRLEDHT
DRLMGSAKIF QLNVPFDKAT LNQAQKEVVK QNGFESAYIR PLIWVGAEKL GLSSRDNSIN
AMVAAWKWGA YLGEEGIQKG IRVKTSSYTH HMTNVTMCKA KAASNYPVSI MANQEVTRNG
YDEAILMDSQ GYVCQGSGEN LFMVKNGELH TPDLAGGALD GITRRTMIQF AEDLGIKVVE
RRITRDEFYL ADEVFMTGTA AEVTPIREYD DRTIGNGGRG DITQKLQSLY FDVVHGRNEQ
YMDWLSFVD
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