Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0871 |
Symbol | |
ID | 5204826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1032227 |
End bp | 1033444 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599092 |
Product | ABC transporter related |
Protein accession | YP_001279773 |
Protein GI | 148652680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.010866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000984124 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAACCA GCCCCAATCG CAGTGTGAAT CATTCTTTTG AAAATGTGAA CCATGAGGAT AGTGCAGATT ATTTAGTGCT TGATAATATC AGTGTCAGCT TTGGTCATAC TGAGGTGGTA AAGTCATTAT CGATGCGTTT GAACCAAGGC GACATCGGCT GTTTGCTTGG ATTTAGTGGC TGTGGTAAGA CCACGGCTTT GCGTGCCATC GCTGGTCTTG AGCAGCCGCA TCAAGGTAGG GTGGTGCTCA ATGGCAAAAC CTTAACTGAT ATTAATCAAG GTAAGGTTAC TGTACAGGTT ATGCCAGCTA AGCGTGATAT GGGTATGGTG TTTCAAGACT ATGCACTGTT TAGCCATCTG ACAGTCAGTG AAAATATTGG CTTTGGTTTA CACCGCTGGA GTAAGGCAGA TAAGGCGGCA CGTATACAAG AGATGCTAGA GTTGGTGGAA TTGACTGAAC ACGCCAACAA GCGTATCAAT CAGCTCTCAG GTGGTCAGCA GCAGCGCATT GCTTTAGCGC GCGCTTTGGC GCCTAAGCCT GAGCTGTTAT TACTTGATGA GCCATTTTCA AACCTAGATA TGATGCTGCG TGAGTCATTA GCAGCCAAGG TGCGAGACAT CCTAAAGCGC ACCCATACCA CGGCCATCTT AGTCACCCAC GATCAGCATG AAGCCTTTGC TATTGCTGAT AAAATTGGGG TGATGCATAA CGGTAAGCTT GCACAGTGGG CGACCCCTGA TGAGCTGTAT CATGAGCCAA GCAGTCCATT TATCGCCGAG TTTATCGGGG AGGGGGCTAT GATTGATGGG GTCATTGAAC AAGGTGTTAT CAAGACTGCA CTGGGGGATA TTAAGCGCTA TCCTGAGCCG ATTCATGCCA CTCATAAAGG CTTTGACTAT GATACTTATT TTAGCCAAGG TGAGGTGTGT GAGTATGACT TTCCTAATGG CACCAAGATT AAAGTGCTCA TTCGCCCAGA TGACATAGTA CATGATGATC ATAGCCCTCA GCGTGCCATG GTAGTAGAGC GGGTGTTTCG CGGTGCCAAC TTCTTATATC GTCTGCGTTT GGATAATGGC GAGGAAGTGC TGTCTTTGGT TTCAAGCCAC CATGATCACC CCGTGGGCGC AGACATAGGG TTTCGGCCGC TAATGGCGCA TGTGGTATTG TTCCAAGGTG ATAATTTAGA AGACATGACC ACGTGGCAGC GTATCTAA
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Protein sequence | MQTSPNRSVN HSFENVNHED SADYLVLDNI SVSFGHTEVV KSLSMRLNQG DIGCLLGFSG CGKTTALRAI AGLEQPHQGR VVLNGKTLTD INQGKVTVQV MPAKRDMGMV FQDYALFSHL TVSENIGFGL HRWSKADKAA RIQEMLELVE LTEHANKRIN QLSGGQQQRI ALARALAPKP ELLLLDEPFS NLDMMLRESL AAKVRDILKR THTTAILVTH DQHEAFAIAD KIGVMHNGKL AQWATPDELY HEPSSPFIAE FIGEGAMIDG VIEQGVIKTA LGDIKRYPEP IHATHKGFDY DTYFSQGEVC EYDFPNGTKI KVLIRPDDIV HDDHSPQRAM VVERVFRGAN FLYRLRLDNG EEVLSLVSSH HDHPVGADIG FRPLMAHVVL FQGDNLEDMT TWQRI
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