| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0821 |
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| Symbol | |
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| ID | 5205538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 976013 |
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| End bp | 976618 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599042 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001279723 |
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| Protein GI | 148652630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.301843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAAG GACAAACGCT TCAAGATCCA TTTTTAAATT CTTTGCGCAA AGATCGCATA
CCCGTATCTA TCTTTTTGGT AAATGGTATT AAACTACAAG GTCAAATTGA ATCTTTTGAC
CAGTATGTGG TGTTGTTAAA AAACACGGTC AGCCAAATGG TATATAAGCA TGCCATATCA
ACAGTAGTAC CTGCCCGCAA TCCACGTAGC AGTGGAGCAA CACCTGGCGG CTCTATTCAA
CAACCTGCAG GCTACCCTAG TGCAGGCGGC TTTAGTGCAC CGCCAGCTGC AGGGGGATTT
GATCGAGGCG CGCCTGGTTT TGAGCCGGGT GGTTTCGCCA GTAAGCGCAG CGGCTTTAAT
CGTGGCGGCT TTGCCGATCG CGGTTTTAAT CAAGAGCGTG GCGGCTTTGC CCAAGAGCGT
GGTTTTGGGG TAGAGCGCGG CTTTGAAGGT GATCGTGGTT TTGATTCTGA TAGAAGCTTT
GGCGCCAGTC GTCCACAACC ACAGCGCGGC TTCGATGAGC GTAGCTTTGA AAAGCGTGGC
TTTGCAGCGC CTAACCAGGT CGATAATGAT GAAGACTTAG GTGGTGGTTT TGGCAGTGAT
GATTAA
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| Protein sequence | MSKGQTLQDP FLNSLRKDRI PVSIFLVNGI KLQGQIESFD QYVVLLKNTV SQMVYKHAIS
TVVPARNPRS SGATPGGSIQ QPAGYPSAGG FSAPPAAGGF DRGAPGFEPG GFASKRSGFN
RGGFADRGFN QERGGFAQER GFGVERGFEG DRGFDSDRSF GASRPQPQRG FDERSFEKRG
FAAPNQVDND EDLGGGFGSD D
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