| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0760 |
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| Symbol | |
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| ID | 5204901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 906874 |
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| End bp | 909477 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598979 |
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| Product | ABC transporter related |
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| Protein accession | YP_001279662 |
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| Protein GI | 148652569 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00472894 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTA ATCAAAATCC AGAAAACAAT CTAGGCCCCA AAAGCTCGGG AGCGGCACCG
GACCATACAG ATGGCTTGGG TGAGTTGGTC AGTAGTGACC AGCAGCTAAC CACTGCCCAG
TCTTTGGCCG ATGCACTCAA ACATATTTTA AGCCAGCAAG GCTATCCGGT AGACAATATC
CGTTTGCAAG ATGTTATTAG AAAGCATGAT ACCTCTCGGG CGATAGAGCA GGGCAGAGGC
ATCAATACCT TAGGTGGTAT TGTCGAGGTG CTCAGAGGTC TAGGTATTGA AGAGTCTCCA
GAGATTTTAC AGCAGCCAGA TGCAGCATTT TTACCGCTTC TGGCGTATCA CATCAGATAC
GGCTGGGGAG TTATTGACGG TAAGAGCCCA CAAGGGTCTT GGAATCTGCG CCAAGAGGCT
TTTACCCATC CAGTAAGCTT AGATGAGGTC AAACTGGTTT TACGCCTGCG TCTAAAAGAA
AATCATATCA AAAAGCGCAA CGCCAACTTT AGTGATTTAC TAAAAAAGGA TTTGTTTCGT
TACAAAGGCG TCGTGATAGA GGCCGTTATC GCCTCCTTCT TAATTAACTT CTTAGCGTTA
GCGGTGTCTT TATTCTCAAT GCAAGTGTAT GACCGAGTCA TTCCGACCCG AAGTCAATAT
ACGCTGATTA TCTTAGCCAG TGGTGTGGCA CTGATTATTA TTTTTGAATC CTTCATGAAA
TTTGCACGCT CTAAAATCAT GGATAAGGTG GTGGTAGGGC TCGATCAGTA TTTATCACGT
GAAGTGTTTC AGCGTCTGCT CCGAGTGCGT ATCGACCAAA TGCCAGGCTC AGTAGGCTCT
ATGGCGGCAC AGTTAAGGGG CTATGAGCAG GTACGTAGCT TTTTTACGGC CAGTACTCTA
TTTGGTCTGG TTGATTTACC TATGACCATA TTATTCATCA CGTTGATTGC TTATATTGGC
TCACCTTTGG TGGCATTGGT GCCTATTATT GCCGCTATTA TTGCCGTTAC TATGGGATTA
ACAGCACGCA AACGTATTGA TGCCATTGCC GCTGAAGGTG CTTCTGCCTC CTACTACAAA
ACCGGTCTAT TGGTTGAAAC GGTAGAAGGG GTTGAGACCA TTAAAGCAGG GGCGGGTAGC
TGGAAGTTTT TATCACGGTG GCTTGATGTG ATGAACATCA CCATCAAAAA CGATTTAAAC
ATGAAACACG CCAATGATAA TTTAAGTTAT TTTGCGCAGA TGCTGCAGCA GTTTAGTTAT
GTGGGTATTG TGATTGTCGG CTCTTTTGTG GTGATGAGCG GTGATATGAC AATGGGTGGC
CTAATTGCCT GTTCTATCTT GGGCGGGCGT GTATTGGCAC CGGTTATGGC CATTCCAAAC
TTATTGGTAC AGTACTCGCA TGCCAAGGCT GCAAAAAGCA TGATTGAGTC TATCTTTGCG
CTAGAGCAAG ACAACCATGG GGTAAATTAT CCGTTGTCTC CTACCAAAAT CCGTGGCCAT
TATCAGTGTG ATGACTTGGT ATTTAATTAC ACCGGTAATG ATCGTCCTGC TGTGAGTGTC
AAAAGGCTGG TCATTCAGCC TGGGGAGCGT ATCGCTATTT TAGGCCCCAT TGGTTCAGGC
AAATCTACTT TATTAAAACT GCTCTCAGGT CTATACGCAC CCACCTCAGG ACGTATCTTG
TTAGATGGAT TAGATATTCA GCAAATTAGC CGTGAATCGC TGAGCGAGCA GGTAGGCTAC
TTACAACAAG ATCACCGCTT GTTCCAAGGC ACACTGCGTG AAAACTTACT TATCGGTATG
CCTGCACCCA ATGATGATGT GCTCCATGAT GCGCTGCAAA AGACAGGACT GATTAATCTG
GTATCGAACC ACTCAAGCGG CTTGGATTTG CCGATTAGTG AAGGCGGCCG AGGTCTGTCC
GGTGGTCAAA AGCAGCTGGT GGCCTTCACG CGTTTGCTAC TTACTAAGCC ATCAGTGTTA
TTAATTGATG AGCCGACCGC TTCTATGGAT AACCGTCAAG AACAGCGCTG CTTGCAGGTA
CTGCGCCATG AGCTGCAGCA AGGTCAGACT TTGGTAGTAT CGACTCATAA AACAGCGCTA
CTTGACTTGG TAGATCGCAT TATCATTATG GACAACCATC AGATTGTGAT GGATGGGCCA
AAAGAGGCCG TGCTTAAACA GTTGATGCAA AATGAGCAAG CCAAACGCCA AGGCAGTAAT
GAGCAAATTA CTCAGCAGCA AGCGCCAAGA GCCGCCATAC AGGCTACGGC AAAAGGCCCT
AATTCGCCCC AGCCAGGGAC GCCGCCGAAC GCCCCTCAGT CTCAAGGTCC TACAGGTCAG
CCGCAACATC CAAAGCCAGC GGTTGATGAT ATAAATGCCG CCAATAGCGG ACAAGCGCCA
AGCCGTCCTG CCAATCAGCA GATTGTTATT AAACCGGCCT CTGAGATAAA AGCTACGCAG
ACGCCAAGTG CAGATGTTAA CGCCACTACC AATCAATCAC AGTCAACATC ACAGGTCAAC
CAAGCTGGCG CTGAAGACCA AAGAGCGGCA TCAACAGCTG TTAAAAGTAG TATTGTCATT
AACCCAAAAT CTGAAGAGAA GTAG
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| Protein sequence | MSTNQNPENN LGPKSSGAAP DHTDGLGELV SSDQQLTTAQ SLADALKHIL SQQGYPVDNI
RLQDVIRKHD TSRAIEQGRG INTLGGIVEV LRGLGIEESP EILQQPDAAF LPLLAYHIRY
GWGVIDGKSP QGSWNLRQEA FTHPVSLDEV KLVLRLRLKE NHIKKRNANF SDLLKKDLFR
YKGVVIEAVI ASFLINFLAL AVSLFSMQVY DRVIPTRSQY TLIILASGVA LIIIFESFMK
FARSKIMDKV VVGLDQYLSR EVFQRLLRVR IDQMPGSVGS MAAQLRGYEQ VRSFFTASTL
FGLVDLPMTI LFITLIAYIG SPLVALVPII AAIIAVTMGL TARKRIDAIA AEGASASYYK
TGLLVETVEG VETIKAGAGS WKFLSRWLDV MNITIKNDLN MKHANDNLSY FAQMLQQFSY
VGIVIVGSFV VMSGDMTMGG LIACSILGGR VLAPVMAIPN LLVQYSHAKA AKSMIESIFA
LEQDNHGVNY PLSPTKIRGH YQCDDLVFNY TGNDRPAVSV KRLVIQPGER IAILGPIGSG
KSTLLKLLSG LYAPTSGRIL LDGLDIQQIS RESLSEQVGY LQQDHRLFQG TLRENLLIGM
PAPNDDVLHD ALQKTGLINL VSNHSSGLDL PISEGGRGLS GGQKQLVAFT RLLLTKPSVL
LIDEPTASMD NRQEQRCLQV LRHELQQGQT LVVSTHKTAL LDLVDRIIIM DNHQIVMDGP
KEAVLKQLMQ NEQAKRQGSN EQITQQQAPR AAIQATAKGP NSPQPGTPPN APQSQGPTGQ
PQHPKPAVDD INAANSGQAP SRPANQQIVI KPASEIKATQ TPSADVNATT NQSQSTSQVN
QAGAEDQRAA STAVKSSIVI NPKSEEK
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