| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0743 |
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| Symbol | |
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| ID | 5205178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 885386 |
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| End bp | 887041 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640598962 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001279645 |
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| Protein GI | 148652552 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.341364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACG ATTCAATAAC CCCCTTATCA AAAAAGACGT CTATGTTAGA TACCACAGCG
GAGTCTGTGG TATCGCAGAC CGTGCAGCAG GTGGTGTTTG AGTTAATGCG CACGCTTAAC
ATGACCACCG TTTTTGGTAA TCCTGGGTCC ACTGAACTGA ATTTTCTGAC CAACTTTCCT
GAAGACTTCT CTTATGTATT AGGCTTGCAT GAAGCTTCAG TGGTCGGTAT GGCAGATGGT
TATGCTCAGG CTACAGGTAA TGCCGCTTTT GTTAATCTAC ATTCGGCTGC AGGTGTGGGC
AATGCGTTAG GCAATATTTT TACCGCCTAC CGCAACCACA CCCCGTTAGT CATTACAGCA
GGGCAGCAAG CCCGTAGCTT ATTACCCTTT GCTCCGTATT TGGGCGCTGA GCAAGCTGCA
CAGTTTCCAC AGCCTTATAT TAAATGGAGT ATTGAGCCTG CCCGCGCGGA AGATGTGCCG
CTAGCTATTG CTCAGGCATA TTTAATCGCC ATGCAGCACC CACAGGGCCC GACATTTGTG
TCGATTCCGT CCGATGATTG GGACAAGCCT GCGGTATTGC CACTGCTATC ACAGTCTTGT
GGCCATAGTA TTCCAAGCCC AGATGCGTTG GCTGAGCTGG TAGAGGTTAT GTCAACCAGT
CAGAATATGG CACTGGTTGT TGGCTCAGAT GTTGATCGCC AAGGGGGTTT TGAGTTGGCG
GTTTCTGTCG CAGAAGCGTG TCAAGCTCCT GTGTGGGAAG CGCCAAACTC CAGTCGAGCA
AGTTTTCCTG AAAACCATCC TTTATTTGCC GGATTCTTAC CTGCAATTCC TGAGAAGCTG
AGCGAAAAGC TACTTGGCTA TGATACGATT GTGGTGATAG GGGCACCTGC TTTTACTTTA
CATGTTGCAG GGACGCTCTC GCTCAAAAAG AGCAAGATTT ATCAGCTTAC CGATGATCCA
CAGTATGCGG CTCAATCAGT GGCAACAAAA ACCTTATCAG GCAATATACG CGATAGCCTA
CAAGCGCTAT TAGACAAATT GCCCACGAGT ATGACACCTC GCTCAGGGCT TGATTTGCCG
GTTCGTAAGC CTGCCGCTGA GGTTCAGGGC AGCAATCCAA TTAGCATTGA GTACGTGATG
GCGACATTGG CGAAATATTG CCCAGAAGAT GTCGTTATCG TTGAAGAGGC TCCCTCACAC
CGTCCTGCGA TTCAGCGTTA TTTGCCCATT ACTCAGCCTA AGAGTTTTTA TACGATGGCA
AGCGGGGGAC TGGGTTATGG GTTACCGGCT GCCGTTGGGG TTGCTTTGGG CACCCAGCGT
CGCACCCTAT GTCTCATTGG TGATGGCTCC TCCATGTATT CTATCCAAGC CATCTGGACC
GCCGTACAGC ATAACTTACC GGTTACGGTC ATTGTGTTGA ATAATACAGG CTATGGGGCG
ATGCGCTCGT TTAGTAAGAT TATGGGCAGC ACGCAAGTAC CAGGGTTAGA CCTACCTAAT
ATTAATTTTG TTCAGCTGGC ACAAAGTATG GGATGCCAAG CGCAAAAAGT AACAGACTAT
TCTGTGCTTG ATAAAGTGTT CGCTGATACC ATGCAAGCAG CGGGTAGTTA TTTGCTAGAG
ATTATGGTCG ATGCCAATAC AGGCGCTGTC TATTAG
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| Protein sequence | MQHDSITPLS KKTSMLDTTA ESVVSQTVQQ VVFELMRTLN MTTVFGNPGS TELNFLTNFP
EDFSYVLGLH EASVVGMADG YAQATGNAAF VNLHSAAGVG NALGNIFTAY RNHTPLVITA
GQQARSLLPF APYLGAEQAA QFPQPYIKWS IEPARAEDVP LAIAQAYLIA MQHPQGPTFV
SIPSDDWDKP AVLPLLSQSC GHSIPSPDAL AELVEVMSTS QNMALVVGSD VDRQGGFELA
VSVAEACQAP VWEAPNSSRA SFPENHPLFA GFLPAIPEKL SEKLLGYDTI VVIGAPAFTL
HVAGTLSLKK SKIYQLTDDP QYAAQSVATK TLSGNIRDSL QALLDKLPTS MTPRSGLDLP
VRKPAAEVQG SNPISIEYVM ATLAKYCPED VVIVEEAPSH RPAIQRYLPI TQPKSFYTMA
SGGLGYGLPA AVGVALGTQR RTLCLIGDGS SMYSIQAIWT AVQHNLPVTV IVLNNTGYGA
MRSFSKIMGS TQVPGLDLPN INFVQLAQSM GCQAQKVTDY SVLDKVFADT MQAAGSYLLE
IMVDANTGAV Y
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