Gene PsycPRwf_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0717 
Symbol 
ID5206394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp858664 
End bp859953 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content48% 
IMG OID640598938 
Producthypothetical protein 
Protein accessionYP_001279621 
Protein GI148652528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00086349 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACACC CAACTAATAA CAACGAAAAA AATGACGGTC TTGCAAATCG ACTTAACCAA 
GAGTGCTACT GCATTACCCT TGATCGTAAA GCGCTTAATA CAAGCCTTCA AGATCAATTG
GTAGAAACTA GAAACAATCC AATAGGAGCG AACGAGCTTA ATAAGCTTTT TTCAGCAACA
CCCGTGTTCG TTCCCAAAAC AGAGATAGAG GCGATGGAGC GAATCGTCAG GGCTATCGAG
TCAGCTGCCG AACTGCCATT GTATCAAGAG CAAGTGCTGT CGTGGGCACC AGAAATAGCT
GCTTTCGACC CAGGCCCAAT AGGGGCCCTC ATGGGTTATG ACTTTCACTT GGGTAGCGAT
GGACCTCAGC TCATCGAGGT CAATACTAAT GCCGGTGGCG CATTTCTGAA TGTGTTGCTC
GCTCGCGCAC AAAAACGCTG TTGCAACCCC TCAGAGCAAA GCGCTGCAAC CAATCAAATG
CTAGATAGGT TCGAGGAAGC AGTGTTTGAC ATGTTCAAAC AGGAGTGGCA GCGACAGTCC
GCTGTTGCTA TGCCCAATCG GATAGCCATT GTGGACAATG ACCCCGAGAG TCAGTTCATG
TTCTTAGAGT TTGAGTTAGC CTGTCAACTG CTCCAAGCTA GAGGTATTGA TACTGTGATA
CTTGATCCCT CTGAACTCGA GTATATCGAC GGTACGTTAA CAGCCCATGG CCAGAAAATC
GATATGATTT ACAATCGGCT TGTCGACTTT GCATTTGAGG ACCCTGACCA TGTATTGCTT
AAGCAGGCTT ATTTAGAGGG TGCTGTGGTA GTGACACCCA ATCCCCGCGT ACATGCTATG
TTGGCCAATA AGCAAAACCT GACATTGCTA TCAGACTCCC AAATATTGCG CTCTTGGGGT
CTGGATGAGG CTGCAGTGGA GTGCCTCGAA AGGTCTGTAC CGAGGACTAA GATTGTATCA
AGAGACGATG CAGCAGAGTT GTGGCTTACT CGGCGGCAAC TGTTTTTTAA GCCAGTTACT
GGTCATGGAA GCAAAGGCGT TTATCGCGGT AGCAAACTGA CTCGACGCGT CTTCGAAAAC
ATTCTGGATG AAGATTATAT CGCACAGACC TTTGTCCCTG CAGGAGAGAG ATCACTCAAA
ATTGATGACA TCGTAACAAC AAGAAAGGTA GATATACGTC TTTATACGTA TGGCGGAAAA
CTGTTACTAC CTGCTGCGCG TGTGTATCAA GGTCAGGTGA CTAACTTCCG TACGCCAGGC
GGTGGATTCG CGCCTGTCTT TCAGGTGTGA
 
Protein sequence
MEHPTNNNEK NDGLANRLNQ ECYCITLDRK ALNTSLQDQL VETRNNPIGA NELNKLFSAT 
PVFVPKTEIE AMERIVRAIE SAAELPLYQE QVLSWAPEIA AFDPGPIGAL MGYDFHLGSD
GPQLIEVNTN AGGAFLNVLL ARAQKRCCNP SEQSAATNQM LDRFEEAVFD MFKQEWQRQS
AVAMPNRIAI VDNDPESQFM FLEFELACQL LQARGIDTVI LDPSELEYID GTLTAHGQKI
DMIYNRLVDF AFEDPDHVLL KQAYLEGAVV VTPNPRVHAM LANKQNLTLL SDSQILRSWG
LDEAAVECLE RSVPRTKIVS RDDAAELWLT RRQLFFKPVT GHGSKGVYRG SKLTRRVFEN
ILDEDYIAQT FVPAGERSLK IDDIVTTRKV DIRLYTYGGK LLLPAARVYQ GQVTNFRTPG
GGFAPVFQV