Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0717 |
Symbol | |
ID | 5206394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 858664 |
End bp | 859953 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598938 |
Product | hypothetical protein |
Protein accession | YP_001279621 |
Protein GI | 148652528 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00086349 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAACACC CAACTAATAA CAACGAAAAA AATGACGGTC TTGCAAATCG ACTTAACCAA GAGTGCTACT GCATTACCCT TGATCGTAAA GCGCTTAATA CAAGCCTTCA AGATCAATTG GTAGAAACTA GAAACAATCC AATAGGAGCG AACGAGCTTA ATAAGCTTTT TTCAGCAACA CCCGTGTTCG TTCCCAAAAC AGAGATAGAG GCGATGGAGC GAATCGTCAG GGCTATCGAG TCAGCTGCCG AACTGCCATT GTATCAAGAG CAAGTGCTGT CGTGGGCACC AGAAATAGCT GCTTTCGACC CAGGCCCAAT AGGGGCCCTC ATGGGTTATG ACTTTCACTT GGGTAGCGAT GGACCTCAGC TCATCGAGGT CAATACTAAT GCCGGTGGCG CATTTCTGAA TGTGTTGCTC GCTCGCGCAC AAAAACGCTG TTGCAACCCC TCAGAGCAAA GCGCTGCAAC CAATCAAATG CTAGATAGGT TCGAGGAAGC AGTGTTTGAC ATGTTCAAAC AGGAGTGGCA GCGACAGTCC GCTGTTGCTA TGCCCAATCG GATAGCCATT GTGGACAATG ACCCCGAGAG TCAGTTCATG TTCTTAGAGT TTGAGTTAGC CTGTCAACTG CTCCAAGCTA GAGGTATTGA TACTGTGATA CTTGATCCCT CTGAACTCGA GTATATCGAC GGTACGTTAA CAGCCCATGG CCAGAAAATC GATATGATTT ACAATCGGCT TGTCGACTTT GCATTTGAGG ACCCTGACCA TGTATTGCTT AAGCAGGCTT ATTTAGAGGG TGCTGTGGTA GTGACACCCA ATCCCCGCGT ACATGCTATG TTGGCCAATA AGCAAAACCT GACATTGCTA TCAGACTCCC AAATATTGCG CTCTTGGGGT CTGGATGAGG CTGCAGTGGA GTGCCTCGAA AGGTCTGTAC CGAGGACTAA GATTGTATCA AGAGACGATG CAGCAGAGTT GTGGCTTACT CGGCGGCAAC TGTTTTTTAA GCCAGTTACT GGTCATGGAA GCAAAGGCGT TTATCGCGGT AGCAAACTGA CTCGACGCGT CTTCGAAAAC ATTCTGGATG AAGATTATAT CGCACAGACC TTTGTCCCTG CAGGAGAGAG ATCACTCAAA ATTGATGACA TCGTAACAAC AAGAAAGGTA GATATACGTC TTTATACGTA TGGCGGAAAA CTGTTACTAC CTGCTGCGCG TGTGTATCAA GGTCAGGTGA CTAACTTCCG TACGCCAGGC GGTGGATTCG CGCCTGTCTT TCAGGTGTGA
|
Protein sequence | MEHPTNNNEK NDGLANRLNQ ECYCITLDRK ALNTSLQDQL VETRNNPIGA NELNKLFSAT PVFVPKTEIE AMERIVRAIE SAAELPLYQE QVLSWAPEIA AFDPGPIGAL MGYDFHLGSD GPQLIEVNTN AGGAFLNVLL ARAQKRCCNP SEQSAATNQM LDRFEEAVFD MFKQEWQRQS AVAMPNRIAI VDNDPESQFM FLEFELACQL LQARGIDTVI LDPSELEYID GTLTAHGQKI DMIYNRLVDF AFEDPDHVLL KQAYLEGAVV VTPNPRVHAM LANKQNLTLL SDSQILRSWG LDEAAVECLE RSVPRTKIVS RDDAAELWLT RRQLFFKPVT GHGSKGVYRG SKLTRRVFEN ILDEDYIAQT FVPAGERSLK IDDIVTTRKV DIRLYTYGGK LLLPAARVYQ GQVTNFRTPG GGFAPVFQV
|
| |