| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0595 |
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| Symbol | metH |
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| ID | 5204736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 713707 |
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| End bp | 717525 |
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| Gene Length | 3819 bp |
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| Protein Length | 1272 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640598810 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001279500 |
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| Protein GI | 148652407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACT GCTCCCATCC CGAACACAAT ACCAAAAAAG ATCTTCCCGA AACTGCTATA
AAAAAAGGGC ATAATCCAGA TAATTTTAAT TTAGTGCCGC CGGCTAAGTT TCCTTTTAAA
GAGCAGCAAC TTACCGCCCG CCAGCGCATC GTAGAACAGC TAAATCAGCG TATCTTAATG
CTAGACGGCG CCATGGGTAC CCAGATTCAG ACCTTTAAGC TGGGCGAGTC TGATTACCGC
GGTGAGCGCT TCGCTGATTT TACTCAAGAT GTACAAGGTA ATAATGACCT ATTGGTATTG
ACCCAGCCTG AACTCATTAA AAGCATCCAT CGTGATCACC TAACAGCAGG CGCCGATATT
ATTGAGACCA ACAGCTTTAA CGGCACTCAG ATATCTATGG CAGATTATGC GATGGAGCAC
TTGGTCCCTG AGATTAACAA AGAGGCAGCC CGTCTTGCCC GTGAAGTGGC CGATGAATTT
ACGGCACAAA ATCCTGACAA ACCACGCTTT GTGGCAGGGG TTATTGGCCC GACCTCACGC
ACTTGTTCGT TATCTCCAGA TGTCAATGAC CCCGCTTATC GTAACGTCAC CTTTGACGAG
TTGGTAGACA ATTATACCGA AGCCTTATTT GCACTAATTG AGGGTGGTAT CGATCTGGTA
TTAATTGAGA CCATCTTTGA TACGCTAAAC GCCAAAGCGG CGATTTTTGC GGTGACCGGC
GTGTTTGAGA CAATTGGTTT TGAGTTGCCC ATAATGATAT CAGGCACCAT TACCGATGCC
TCTGGTCGTA CCTTGTCGGG TCAGACTGCT GAAGCCTTTT ATAACTCAAT CCGCCATGCC
AAGCCGTTAT CGGTAGGCTT TAACTGTGCA CTCGGTGCTG ATGCTTTAAA ACCACACATT
CAAACCTTAT CTGACATCGC CGATACGTAT ATCTCAGCGC ACCCGAATGC CGGCTTGCCC
AATGAATTTG GTGAATATGA CGAAACACCA GAGCAAACCG CGGCGCTACT TGATGGCTTT
GGTAAATCAG GCCTGTTAAA CATCGTTGGT GGCTGCTGTG GTACTCGTCC TGAGCACATT
AAAGCCATCC ATGATGTGAT GCAAAAATAT CCACCACGCC AGATCCCCAC CATTGCACCT
GCCTGCCGTT TATCCGGTCT TGAGCCATTC ACCATCACCA AAGATAGCTT ATTCGTCAAC
GTCGGTGAGC GTACCAACGT GACCGGCTCC AAAAAGTTCT TACGCCTGAT CAAAACCGGT
GAATTCACCG AAGCGTTAGA TGTGGCACGT AACCAAGTTG ACGGCGGCGC TCAAATTGTC
GACATCAACA TGGATGAGGG GATGCTCGAC TCCAAAGGTG CGATGATTCA CTTCTTAAAC
TTGGTGGCCG GCGAGCCGGA CATTAGCCGT GTACCATTGA TGATTGACTC CTCAAAATGG
GACATCATTG AAGAGGGATT AAAACGCACT CAAGGTAAAT CGGTAGTGAA CTCCATCTCG
CTCAAAGAGG GTTATGATGA GTTTGTGAAG CATGCCAAAT TATGTATGCG TTATGGTGCG
GCAGTGATTG TTATGGCCTT CGATGAAGAC GGTCAGGCTG ACAGCTATGA GCGTAAAATT
CAGATTTGTC AGCGCAGTTA TGACATCTTA GTTAATGAAG TGGGCTTCCC CTCTGAAGAC
ATCATCTTTG ACCCCAATAT CTTTGCGGTG GCCACCGGTA TTACCGAGCA CAACAACTAT
GGCGCAGACT TCATTAATGC TACCCGCTGG ATTACTGATA ACTTACCCAA CGCCATGGTG
TCAGGTGGTG TGTCAAACGT GTCATTTAGC TTCCGCGGCA ACCCCATCCG TGAAGCGATT
AACGCCGTAT TCTTATACCA TGCCATTCAA GCAGGCTTAA CCATGGGTAT CGTCAACCCT
GCCATGCTCG AGGTGTACGA TGAGATTCCA AAAGAGGCTC GTGACGCCAT TGAAGATGTG
ATGCTTAACC GTAATCAGGG CGAGTCTGGT CAAGAGGCCA CCGAACGCTT AATGACGATA
GCAGAAGCTT ATGTGGCCGG TGGTAAAAAG AACGATGGCA CCATTGACTT GTCTTGGCGT
GAGCAATCGG TCGAAAAGCG TATCGAGCAT GCCTTAGTCA AAGGTATCAC CACTTATATT
GATGAAGACA CCGAAGAGGC ACGCCTAAAA TACCCCAAAC CACTACACGT CATTGAAGGC
CCACTCATGG ATGGCATGAA CGTGGTCGGC GATCTATTTG GCGCCGGTAA GATGTTCTTA
CCACAAGTGG TGAAATCTGC CCGTGTGATG AAACGTGCGG TTGCGGTATT AAACCCTTAT
ATTGAAGCCG AAAAAGTCGA AGGTGAGGTC AAAGGTAAAG TGGTTATGGC GACCGTCAAA
GGCGACGTGC ACGATATCGG TAAAAACATC GTTGGCGTGG TACTCGGCTG TAACGGTTAT
GACGTAGTCG ACCTTGGGGT GATGGTGCCA TGCGACAAAA TATTGGACAC CGCCATTGCC
GAAAAGGCGG ACATCATTGG CCTGTCGGGT CTAATTACCC CAAGCCTTGA TGAGATGGTC
TATGTCGCCA AACAAATGCA AGAGCGTGGC ATGACCCTGC CGCTAATGAT CGGTGGCGCG
ACGACATCCA AAGCGCATAC TGCGGTAAAA ATTGAACCCA ATTATCAAAA CGATGCGGTC
ATCTACGTTT CCGATGCGTC GCGTTCTGTG GGCGTAGTCA CCAAGCTATT GTCTCAAGAG
CACCGAGTAG AGCTGCTTCG TGAGACGCGC GAAGAGTACC AAAAAGTACG CGAGCGCTTG
GCCAATCGTA AACCAAAAGC AGCCAAACTC AGCTACCAAG AGTCTATAGA ACAAGGCTTT
AAATTTGATT GGGACAACTA CACCCCGCCT GTACCCAACG AGCAAGGTCA AATCATCTTT
GATAACTACC CTATCGAAAA CTTACTGCCG TATATTGACT GGACGCCCTT CTTTGTCTCT
TGGGGCTTGG TCGGCAAATA TCCAAAAATC TTTGATGATG AGGTGGTCGG TGCGGAAGCC
AAAGACCTAT TTGCCAATGC CAAAGCACTG ATGCAAACAT TCATCGATGA GCAGCTGGTC
ACGCCAAAAG GGGTATTCAA AATCATGCCT GCCCGCCGTA CCGATCATGA TACCGTGACC
GTGTATGACA AAGAGCCAAG CGCTGGCGGA CAGCCCACTC ATGTGTTTGA GCATCTGCGC
CAACAGTCGG ACAAAGCCAG TGGCAAGCCA AACTATAGCT TGGCGGACTT TATCTCTCCC
TCTGAGGACT ATGATGATTA TCTTGGCGGC TTTACGGTCT CTATCGTCGG CGCCCAAGAG
CTGTCTGACA GCTACAAAGA GGCCGGTGAT GACTACAACG CCATTATGGT ACAAGCCTTA
TGTGACCGCT TAGCTGAAGC CTTTGCCGAG CATTTACACG AATTAATCCG TACCAAATAC
TGGGGTTACC AGCCTACTGA ACAGTTGACC AATGAAGAGC TGATTAAAGA AAAATACGTC
GGTATCCGCC CAGCACCGGG CTACCCTGCC TGCCCTGAGC ACACCGAAAA AGGCAAGCTG
TTTGATTGGT TAGACACCAC CAATGCGATT GGTACCTATC TGACCGAAAG CTTTGCGATG
TGGCCGGCGT CCTCAGTCAG CGGCTTCTAT TACTCGCATC CTGAGAGCAC GTACTTTAAT
GTGGGTAAAA TTGATCGTGA TCAGCTAGAG GACTATGCCA AACGTAAGGA TTGGGATATT
AAGACCGCTG AGAAGTGGTT AAATCCTAAC TTAACGTAA
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| Protein sequence | MANCSHPEHN TKKDLPETAI KKGHNPDNFN LVPPAKFPFK EQQLTARQRI VEQLNQRILM
LDGAMGTQIQ TFKLGESDYR GERFADFTQD VQGNNDLLVL TQPELIKSIH RDHLTAGADI
IETNSFNGTQ ISMADYAMEH LVPEINKEAA RLAREVADEF TAQNPDKPRF VAGVIGPTSR
TCSLSPDVND PAYRNVTFDE LVDNYTEALF ALIEGGIDLV LIETIFDTLN AKAAIFAVTG
VFETIGFELP IMISGTITDA SGRTLSGQTA EAFYNSIRHA KPLSVGFNCA LGADALKPHI
QTLSDIADTY ISAHPNAGLP NEFGEYDETP EQTAALLDGF GKSGLLNIVG GCCGTRPEHI
KAIHDVMQKY PPRQIPTIAP ACRLSGLEPF TITKDSLFVN VGERTNVTGS KKFLRLIKTG
EFTEALDVAR NQVDGGAQIV DINMDEGMLD SKGAMIHFLN LVAGEPDISR VPLMIDSSKW
DIIEEGLKRT QGKSVVNSIS LKEGYDEFVK HAKLCMRYGA AVIVMAFDED GQADSYERKI
QICQRSYDIL VNEVGFPSED IIFDPNIFAV ATGITEHNNY GADFINATRW ITDNLPNAMV
SGGVSNVSFS FRGNPIREAI NAVFLYHAIQ AGLTMGIVNP AMLEVYDEIP KEARDAIEDV
MLNRNQGESG QEATERLMTI AEAYVAGGKK NDGTIDLSWR EQSVEKRIEH ALVKGITTYI
DEDTEEARLK YPKPLHVIEG PLMDGMNVVG DLFGAGKMFL PQVVKSARVM KRAVAVLNPY
IEAEKVEGEV KGKVVMATVK GDVHDIGKNI VGVVLGCNGY DVVDLGVMVP CDKILDTAIA
EKADIIGLSG LITPSLDEMV YVAKQMQERG MTLPLMIGGA TTSKAHTAVK IEPNYQNDAV
IYVSDASRSV GVVTKLLSQE HRVELLRETR EEYQKVRERL ANRKPKAAKL SYQESIEQGF
KFDWDNYTPP VPNEQGQIIF DNYPIENLLP YIDWTPFFVS WGLVGKYPKI FDDEVVGAEA
KDLFANAKAL MQTFIDEQLV TPKGVFKIMP ARRTDHDTVT VYDKEPSAGG QPTHVFEHLR
QQSDKASGKP NYSLADFISP SEDYDDYLGG FTVSIVGAQE LSDSYKEAGD DYNAIMVQAL
CDRLAEAFAE HLHELIRTKY WGYQPTEQLT NEELIKEKYV GIRPAPGYPA CPEHTEKGKL
FDWLDTTNAI GTYLTESFAM WPASSVSGFY YSHPESTYFN VGKIDRDQLE DYAKRKDWDI
KTAEKWLNPN LT
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