| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0569 |
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| Symbol | |
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| ID | 5206081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 683754 |
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| End bp | 684980 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640598784 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001279474 |
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| Protein GI | 148652381 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00612965 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTAT CGCTTGAAAA AGATAAGATT CGTTTTTTAC TTCTAGAGGG GTTGCACGAG
AATTCACTAA AAGTATTAAA CGATGCTGGC TATACCAACA TTGAATATTT ATCACACGCG
CTAGACCCCG AAGAGTTGGC TGAAAAAATC AAAGACGCCC ACTTTATTGG CATTCGTTCG
CGCACTCAGT TGACCCGTGA TATCTTAGAA CAAGCGGATA AATTAATTGC CATTGGTTGC
TTCTGCATTG GTACCAACCA AGTGGATCTA GATGCCGCTC GTGAGCTTGG TATTCCTGTC
TTTAACGCCC CTTATTCCAA CACCCGCTCA GTGGCAGAGT TGGTCTTAGC CGAAGCGATT
ATGTTATATC GTGGTATCCC CGAAAAAAAT GCTGTGGTTC ATCGCGGCGG CTGGGGTAAG
TCTGCTAAGA ACTCACATGA AGTTCGCGGT AAAGTGATGG GTATCGTGGG CTACGGCTCA
ATCGGCTCAC AGTTGTCTGT ATTGGCTGAG AGCTTGGGCA TGAAAGTCAT CTATCATGAT
GTGGTTACCA AGCTACCCTT AGGTAATGCC GTTCAGGTTG GCAGCTTAGA GGAATTATTA
AACAAAGCAG ATATCGTTAC CCTGCATGTG CCCGACCTGC CCAGCACACG TTATATGATG
AAAAAAGAGC AGTTTGATCA AATGAAAGAG GGCAGCTATT TTATCAACGC TGCTCGTGGT
ACTTGTGTTG AGATTGATGA TCTTGCTGCT GCACTTGAGT CAGGCCGAGT GTTAGGCGCG
GCTGTAGACG TGTTCCCTAA AGAGCCAAAA TCAGCAGATG AAGAATTTGA ATCACCACTG
CGTAAGTTTG ATAACGTCAT CTTGACGCCT CATATCGGTG GCTCAACTCA AGAAGCTCAG
GCCAATATTG GTCTTGAAGT GGCTGAGAAA TTTGTTAAAT ATTCAGATGC CGGTGATACC
ACCACTTCTG TGAACTTCCC TGAAGTCAGC ATTCCAGTCA AAGAAGGCTC GCACCGTTTG
CTGCATATTC ACAAAAACGT ACCGGGTGTA TTGTCGCAAA TTAACTCATC ATTCGCGTCA
GCGGGCATCA ACATTTTAGC CCAAAGCTTG ATGACAGAAG GCGATGTGGG TTATTTGGTA
ATGGATGTCG ACAACCGCAA CTCACAAGAA GCGCTCGATA AGCTTAGAGA TATTGAAGAG
ACCATTCGCG TTCGCGTCTT GTTCTAA
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| Protein sequence | MALSLEKDKI RFLLLEGLHE NSLKVLNDAG YTNIEYLSHA LDPEELAEKI KDAHFIGIRS
RTQLTRDILE QADKLIAIGC FCIGTNQVDL DAARELGIPV FNAPYSNTRS VAELVLAEAI
MLYRGIPEKN AVVHRGGWGK SAKNSHEVRG KVMGIVGYGS IGSQLSVLAE SLGMKVIYHD
VVTKLPLGNA VQVGSLEELL NKADIVTLHV PDLPSTRYMM KKEQFDQMKE GSYFINAARG
TCVEIDDLAA ALESGRVLGA AVDVFPKEPK SADEEFESPL RKFDNVILTP HIGGSTQEAQ
ANIGLEVAEK FVKYSDAGDT TTSVNFPEVS IPVKEGSHRL LHIHKNVPGV LSQINSSFAS
AGINILAQSL MTEGDVGYLV MDVDNRNSQE ALDKLRDIEE TIRVRVLF
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