Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0553 |
Symbol | |
ID | 5204666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 660577 |
End bp | 661182 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598768 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_001279458 |
Protein GI | 148652365 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000164562 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCTTTA TGCAGCACCT AAAATCCAGT TGGTACCAAA AGCGCCTGCT ACGACCTGAG CTCAATGGGA TGTTTGAGCC GCCGGTGGAG AATCAGTGGG TGGCCATTGA TTGTGAGATG AGCGGTCTTA ACGCCAAAAA AAACCATTTA CTGTCTATCG CAGCCATTCA TATTAACGGG TCTGTCATCG ATACCGGACA GGGGCTACAT CTTATTTGTC GCCCGCCGGT GATGCCCACC AAGGACACCA TCATCATTCA CGGCCTGCGC CCGATAGATG TCGAAAATGG TTTAAGTTAT GAGCAAATGT TGGCGAAGCT GCTGCCGTTT ATCGGTAATC GCCCCATCGT TGGGTTTTGT CCTCAGCTAG ACATCAGTTT TTTAAACCCG TTAGTCAAAG CTTATATGGG TACTTATCTG CCTAATCCAG TTATTGATAT TCGTACACTT TATAATCGCT ACAGCGGTAA CCGCACCCAA GGTATACCTC ATCAATCTTC GCACCTTAGC GCCATTTGTC AGCAGCTCAA GTTGCCTGAT ATGGCTGCCC ATGATGCCTA TAATGATGCC ATTATGACCG CCATGGCTTT TTTACTATTA AAGTAA
|
Protein sequence | MSFMQHLKSS WYQKRLLRPE LNGMFEPPVE NQWVAIDCEM SGLNAKKNHL LSIAAIHING SVIDTGQGLH LICRPPVMPT KDTIIIHGLR PIDVENGLSY EQMLAKLLPF IGNRPIVGFC PQLDISFLNP LVKAYMGTYL PNPVIDIRTL YNRYSGNRTQ GIPHQSSHLS AICQQLKLPD MAAHDAYNDA IMTAMAFLLL K
|
| |