| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0504 |
|---|
| Symbol | |
|---|
| ID | 5205394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 599288 |
|---|
| End bp | 600391 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640598719 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_001279409 |
|---|
| Protein GI | 148652316 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.829789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAGA CTATGGAATT TAAACTTGAT ACGCGATTGT GGTCTACAAA AGCACGTAAT
TTAAACCCCT ATGTACCCGG AGAGCAGCCC AAGCACGATA ATTTGTGCAA GCTAAATACC
AACGAAAACC CGTTTCCGCC TTCCCCCAAA GTTGTAGAGG CCATTACGGC CGCTTTAAGT
CATGGCGGTG ATCAATTGCG TCTGTATCCG GCACCTGAGT CTGATGCATT AAGGCAGGCT
TTGGCTGATG CTTATGATTT ACAGCTCAAT CAAGTCTTTG TTGGTAATGG CTCAGATGAG
GTTTTGGCGC TAGTATTTGC CAGCTTTTTT ATGAAAGAGC GCCCATTATT GGCGCCGGAT
ATCAGCTATA GTTTTTATCC GGTATACGCC GATACTTTTG GCATTGATTT AGTAAAAATC
CCATTGCGTG ATGATTTTAG TATTGAGACT GATGATTATC GTCAGCCTTG CTCAGGCATT
ATTATTGCTA ACCCCAATGC GCCCACTGGT ATCTTAATGT CACTTGAGGC CATTGATAAG
CTAGCCACTG AGCACCCCAA TGCAGTGATT GTGATTGATG AGGCTTATAT TGATTTTGCC
AGTACCGAGC AGGCGTCAGC CATCCGCTTA ATTGAGACGC ATGATAATCT ACTGGTTACC
CAAACCTTCT CAAAATCACG CTCATTGGCA GGGCTGCGTG TGGGTATGGC TTTTGGTAAT
CCTTCATTAA TTGAAGCGTT AACCCGCATG AAAAACAGCT TTAATAGCTA TCCACTAGAC
CGTTTGGCAC AAGCGGGAGC CTTAGCCAGT GTAGAAGATA AGCTGTATTT TAAGAGTACC
TGTGAGCAAG TCATTGCACT ACGCGAACAG CTAATTGAGC AATTAAGCTC GCTTAACTTC
ACGGTATTGC CATCACAAGC CAACTTTGTG TTTGCCCGCC CACAGCAGGG CAATGCCAGC
GAAGTCGCCC AGCAGCTGCG TGAGCAAGGC ATTATCGTGC GTTATTTTAA TCAGCCAAGA
ATTAATGAAT ATTTGCGCAT TACTGTGGGT ACTGCTGAGC AAAACCGACG TTTGATTGGC
GCCTTACAGC AGATGGCCGG TTAA
|
|---|
| Protein sequence | MIKTMEFKLD TRLWSTKARN LNPYVPGEQP KHDNLCKLNT NENPFPPSPK VVEAITAALS
HGGDQLRLYP APESDALRQA LADAYDLQLN QVFVGNGSDE VLALVFASFF MKERPLLAPD
ISYSFYPVYA DTFGIDLVKI PLRDDFSIET DDYRQPCSGI IIANPNAPTG ILMSLEAIDK
LATEHPNAVI VIDEAYIDFA STEQASAIRL IETHDNLLVT QTFSKSRSLA GLRVGMAFGN
PSLIEALTRM KNSFNSYPLD RLAQAGALAS VEDKLYFKST CEQVIALREQ LIEQLSSLNF
TVLPSQANFV FARPQQGNAS EVAQQLREQG IIVRYFNQPR INEYLRITVG TAEQNRRLIG
ALQQMAG
|
|---|
| |