Gene PsycPRwf_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0488 
Symbol 
ID5206244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp581680 
End bp582189 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content50% 
IMG OID640598703 
Productcytochrome c, class I 
Protein accessionYP_001279393 
Protein GI148652300 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00131648 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAT GTGTTCATTC ATCAGCGGGT GCTAAGCGCC TAGCGAGTGC TTTTGGTATT 
AAAAAATCAG TGGCTTTATT GGCGATGGCT GGCTTTGTGG CCTTAGGGAG TGGCTGTACG
CCGACCCCGC CGGATTACAG GCCGCAAGTT ACTGCGCCCG CTTATCAAGG CGGGGATGCC
CAAAAAGGCG AGAAGCTATA CGAGGATAAC TGTACTCAGT GCCACACCAT TCGCCCAGGA
AGCAATAAAA AAGGGCCTCA GTTATTGGGG GTGTATATGG CGCCATCAGC TCAGCTAAAA
GACTATAAAT ACAGTGAAGC GATGAGCCAT GCCAATTGGG TATGGGATGC CAAAACCTTG
GACAAATATA TTGCCGATCC AGAGGCAGTG CTACCAGACA CACGTATGCT TTCTGACCCC
ATGCCAAACA CCCAAGATCG ACAGGATATT ATTGCTTATC TATCGACACT GGGTCATGAT
GCGCCGCCAG TGCCCGAGGA AAAAAAGTAG
 
Protein sequence
MSLCVHSSAG AKRLASAFGI KKSVALLAMA GFVALGSGCT PTPPDYRPQV TAPAYQGGDA 
QKGEKLYEDN CTQCHTIRPG SNKKGPQLLG VYMAPSAQLK DYKYSEAMSH ANWVWDAKTL
DKYIADPEAV LPDTRMLSDP MPNTQDRQDI IAYLSTLGHD APPVPEEKK