Gene PsycPRwf_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0478 
Symbol 
ID5205372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp568093 
End bp569010 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID640598693 
Producthypothetical protein 
Protein accessionYP_001279383 
Protein GI148652290 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTG GTAGCTTACT AATGCTGCTC GATGATATTA GCGTGATTAT GGATGATGTC 
TCGGTAATGA CCAAAGTGGC GGCCAAAAAG ACCGTCGGCG TGCTGGGGGA TGATCTTGCG
CTAAATGCTG AGCAGGTAAG CGGGGTCAAG CCTAGCCGTG AGCTCCCTGT GGTCTGGGCA
GTAGCAAAAG GCTCCATGAT AAATAAGTTT ATCTTGGTAC CTGCCGCGCT TCTTATCAGC
TACTTTGTGC CGTGGCTTAT CACGCCTTTA CTTATGGTGG GTGGCTTGTT CTTATGTTAC
GAGGGTGCCG AAAAGGTTAT TCATAAATTT TGGCCAAAGC TGTTGCCCCA TGATGAAGAG
CAGCAGGCGC GCATCCATGC CAATGCAGAT GACACTGTGG ACTTGGTTGC GCTTGAGAAG
CAGAAAGTAA AAGGTGCCAT TCGAACTGAT TTTATCTTAT CGGCTGAAAT TGTGGTGATT
GGCTTAGGGA CGTTAAGTGC CGCCAATTTA TTAGACAAAG CGATTGTGCT GTCTGTTCTA
GCCATTGGGG TTACCATTGG TATTTATGGC CTAGTGGCAG GTATTGTTAA GATTGATGAC
TTGGGGCTGC ACATGATGCA AAGACCAGGT GCAAGTAAGA TAACCCAAAA AATCGGTGAA
TTCTTATTGT CAGCGGCTCC CAAGCTTATG AAGTTTTTGA CCATCGTAGG CACTATTGCC
ATGTTCTTAG TCGGTGGTGG CATCATCGTA CATGGTATCG GTTATCTACA CCATGCGGTA
GAGGACATTG CACACTTATC TGGTGTATTT GAAGGGTTAT CTACCAATCT ATTAAATGGT
GCCATAGGTT TTGTCATTGG GGTGGTGCTG TTATTTATAT TAACTGCCAT CTCAAAAATG
CGCGGTGACG CCCACTAA
 
Protein sequence
MAGGSLLMLL DDISVIMDDV SVMTKVAAKK TVGVLGDDLA LNAEQVSGVK PSRELPVVWA 
VAKGSMINKF ILVPAALLIS YFVPWLITPL LMVGGLFLCY EGAEKVIHKF WPKLLPHDEE
QQARIHANAD DTVDLVALEK QKVKGAIRTD FILSAEIVVI GLGTLSAANL LDKAIVLSVL
AIGVTIGIYG LVAGIVKIDD LGLHMMQRPG ASKITQKIGE FLLSAAPKLM KFLTIVGTIA
MFLVGGGIIV HGIGYLHHAV EDIAHLSGVF EGLSTNLLNG AIGFVIGVVL LFILTAISKM
RGDAH