Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0472 |
Symbol | |
ID | 5205217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 559448 |
End bp | 560695 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640598687 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001279377 |
Protein GI | 148652284 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCTG ACATCAGTGC GCGTGGACAA GACTTTTATA ACCGTGTCAA AGAGTTTATC CAAACCCAAA TCGAACCTAT TGAAGATGAA TTCTGGCAGC GTTGTCATAA GCTAAATCCT GGTGGCGACT GGCAAAGCTG GCAGTGGCCT GAGCAGTATC ATACTCTGCG CAAACAGGCG AAAGCGGCCG GGCTTTGGAA TATGTTTTTA CCCGATGACA TCTTAGGCGC TGGCCTGTCT GTGACCGAAT ACGCCCCCAT CGCCGAATTG ACCGGCCGTA GCCTCATTGC TCCCAATATC TTTAACTGCA ACGCCCCTGA TAGCGGAAAC ATGGAGCTGT TATGGCGCTA TGGCAATGAG GCACAAAAGC GGCGCTTTTT AATGCCTCTT TTGGAAGGCG AAACCCGTTC TGTATTTTGT ATGACTGAGC CTGCCGTAGC CTCAAGTGAT GCCACCAATA TGCAAGCCAC TGCCATTATT GATGGTGATG ATATTTTCCT AAATGGCCGC AAATGGTGGT CATCTGGCCT CGGTGATCCT GATGTGGATT TTGTTATCTT TATGGCTCAC ACCCCTGATG ACAGCAAAGA CCGCCATCAT CAGCATTCTA TGGTACTGGT GCCGCTAGAC ACTGCGGGGG TTAAGATTGA GCGCATGCTA CAAGTGTTTG GTGATTATGA TGCACCGCAC GGGCATGGTG AGGTAGTATT CGATAATGTA CGCGTGCCGG TAAGCAATAT TATCGGCGGC CCAGGCATGG GCTTTGAGAT TGCCCAAGGT CGCCTTGGCC CTGGCCGTAT TCACCACTGT ATGCGCTGTA TTGGCGCCGC TGAGAAGTCA CTGGAGCTGG CCATTCATCG TGGCATGAGC CGTACCAGTT TTGGCAAACC CATTTTGCAA CTTGGCGGTA ATATGGAGCG CATTGCTGAG GCTCGAGTCA GCATTGACCA AGCTCGCCTG CTTACCCTCT ATGCCGCACA AAAGATGGAC GAAAAAGGGG TAAAAGCGGC CTTAACTGAA ATCTCAGCCA TCAAAGTGGT GGCACCAACG GTGCTACAAG AAGTGGTCGA TATGGCGATG CAAATCCACG GTGGTATGGG CGTCAGCCAA GACACCATGC TCCCAAGATT CTATGCTCAA GCACGCAGCT TACGCTTGGC CGATGGTCCC GATGAGGTGC ACAAGACCAT GATTGCCAAA CTTGAATTAA AGAAATTGGG CTACGGCCGC CCTAAAGCTA AGCCTTAG
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Protein sequence | MMPDISARGQ DFYNRVKEFI QTQIEPIEDE FWQRCHKLNP GGDWQSWQWP EQYHTLRKQA KAAGLWNMFL PDDILGAGLS VTEYAPIAEL TGRSLIAPNI FNCNAPDSGN MELLWRYGNE AQKRRFLMPL LEGETRSVFC MTEPAVASSD ATNMQATAII DGDDIFLNGR KWWSSGLGDP DVDFVIFMAH TPDDSKDRHH QHSMVLVPLD TAGVKIERML QVFGDYDAPH GHGEVVFDNV RVPVSNIIGG PGMGFEIAQG RLGPGRIHHC MRCIGAAEKS LELAIHRGMS RTSFGKPILQ LGGNMERIAE ARVSIDQARL LTLYAAQKMD EKGVKAALTE ISAIKVVAPT VLQEVVDMAM QIHGGMGVSQ DTMLPRFYAQ ARSLRLADGP DEVHKTMIAK LELKKLGYGR PKAKP
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