| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0450 |
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| Symbol | |
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| ID | 5206080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 535598 |
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| End bp | 536605 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640598665 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001279355 |
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| Protein GI | 148652262 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.128068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0153463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTAA ATGCTACCGA GTTTCTGACC CCTAATGCCA TTAATGTGGA TGCGGTTGAC
GAAACCAATG CAAAAGTCAC GCTCGAGCCG TTAGAACGCG GCTTTGGGCA TACCCTAGGT
AATGCCCTTC GTCGCATTCT TTTATCTTCA TTGCCTGGTG CAGCGGTTAT TGAAGCAGAA
ATCGAAGGAG TTGATCATGA ATATTCAACT CTTGAAGGTC TGCAAGAAGA CGTTTTAGAT
TTATTGTTAA ATCTAAAAGG TCTTGCGATT ACTATGCACG ATCAAAATGA AGTGTTTTTA
ACACTAGACA AAAAAGGTCC TGGCATTATC ACTGCGGCAG ATATCGAACT GCCACACAAT
GTTGATATTG TTAACCCTGA ATTGGTTCTA GGTACGCTAG GTGACCGTGG TCATCTAAAA
ATGCGCTTAC GTGTGGTTAT GGGTCGTGGT TACGAGCCTG CTAACCTACG CCGTGAAGAT
GGTGACACGA AGGCCATTGG TCGCTTGAAA TTGGATGCTA GCTTTAGCCC AGTTTCACGT
GTGGCTTATC AAGTTGAAAA TGCTCGTGTT GAACAGCGCA CGGATCTTGA CCGTCTGATC
ATTGAACTAG AAACCAATGG CACGATCGAT CCTGAAGAAG CAATTCGCAA AGCAGCAACT
ATTTTGCAGC AACAAATCTC TATTTTTGTA GATTTAGAAG CAGAAGAAGC GCCAGAGCCT
GTGAAAGAGA AAGAAGAGGT TGACCCTGTA CTATTACGTC CAGTGGATGA CCTTGAACTA
ACGGTTCGCT CAGCCAACTG TTTAAAAGCT GAAAACATTT ACTATATCGG CGATTTGGTT
CAGCGTTCAG AGACTGAACT GCTTAAAACA CCAAACCTTG GTAAGAAATC ATTAACCGAA
ATTAAAGACG TTTTAGCGTC TAAAGGTCTT GAACTGGATA TGCGCCTAGA AAACTGGCCA
CCAGCAGATC TACGTGTTGA TGACCGTTTT TCTTACCGTA GCCGTTAA
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| Protein sequence | MMLNATEFLT PNAINVDAVD ETNAKVTLEP LERGFGHTLG NALRRILLSS LPGAAVIEAE
IEGVDHEYST LEGLQEDVLD LLLNLKGLAI TMHDQNEVFL TLDKKGPGII TAADIELPHN
VDIVNPELVL GTLGDRGHLK MRLRVVMGRG YEPANLRRED GDTKAIGRLK LDASFSPVSR
VAYQVENARV EQRTDLDRLI IELETNGTID PEEAIRKAAT ILQQQISIFV DLEAEEAPEP
VKEKEEVDPV LLRPVDDLEL TVRSANCLKA ENIYYIGDLV QRSETELLKT PNLGKKSLTE
IKDVLASKGL ELDMRLENWP PADLRVDDRF SYRSR
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