Gene PsycPRwf_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0448 
Symbol 
ID5206078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp534412 
End bp534804 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content47% 
IMG OID640598663 
Product30S ribosomal protein S11 
Protein accessionYP_001279353 
Protein GI148652260 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000201817 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00276922 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAG ACACCCGTGG TCGTAAAAAA ACGGCACGTC GTTCGGTATC CGAGGGCGTA 
GCCCACATTC ATGCGTCTTT TAATAACACC ATTGTAACGA TTACTGATCG TCAAGGTAAT
GCATTGGCTT GGGCCACCTC AGGTGGACAA GGCTTCCGTG GTTCACGTAA ATCTACACCA
TTTGCAGCCC AGGTTGCAGC TGAAGTTGCT GGTAAAGCAG CTCAAGAAAC TTATGGTGTA
AAAAATGTCG ATGTTCTGGT TAAAGGTCCA GGACCGGGTC GTGAGTCTGC GGTAAGAGCT
TTAGGTGCAT TAGGTTATAA AATTAACAGC ATATCTGATG TAACCCCAAT CCCACACAAC
GGTTGCCGTC CGCCTAAAAA GCGTCGCGTA TAA
 
Protein sequence
MAKDTRGRKK TARRSVSEGV AHIHASFNNT IVTITDRQGN ALAWATSGGQ GFRGSRKSTP 
FAAQVAAEVA GKAAQETYGV KNVDVLVKGP GPGRESAVRA LGALGYKINS ISDVTPIPHN
GCRPPKKRRV