| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0424 |
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| Symbol | |
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| ID | 5205319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 520354 |
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| End bp | 522195 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640598639 |
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| Product | ribonuclease |
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| Protein accession | YP_001279329 |
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| Protein GI | 148652236 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000319461 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000523275 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAAG AGCTACTCAT TAATGTCAGC CCAATGGAAT CTCGAGTCGC TGTTTTAGAT
AACGGTGTGG TTAGTGAGGT TTATATTGAG CGGCATAATA AGCTGGGTCT GGTTGGCAAT
ATCTATTTGG GTACTGTGGT GCGTGTTTTG CCTGGAATGC AGGCCGCTTT TGTTGAAATT
GGCCAGTCTC GTACCGCCTT TTTGCATGTT AATGATATGC GCCGTATTGC CCGTCCTGCC
CCTACGGCAG ACAAGGCCCC TGAGATACGT CACAACGCTA AGCAAGAACC GACCGTATTA
ACCAGTATGC CAGTAGATCG CTGTGAGCAC ATTGCTGAAA ATGTGGTGAC GGCAAGTGAC
ACCATGGCAT CTGTAATAGC AGAAACTGAG CCCGCTATGG AGGCTGACCC GTTGTCTGCG
AAGACAGAAA TTGAGGCGGG CAGCTTACGC GAAAAAAAAT CGGCTTTAGC AGATGAGTCC
GACAATCTAA AAAATGATCT GCTCGATAAT GCGCTACTTG AGATTGACTC TCCCGATATG
GTGGGTAACG CCATTACCAA AGCCGATACC AAGCCCGCTG CGGTCAAAGA GCGTCAGATT
ATCGAGCCGC CACGTCATGA ATTAATTCAA TATCGGCTGC ATGAAGGCCA AAAAATACTG
GTACAGGTCA CCAAAGACCA ACTCGGTACC AAAGGCGCCC GTCTTACCAC CAATATATCC
TTGCCATCGC GCTATCTGGT ATATTTGCCC TCCAGTGAGC ACATCGGTAT CTCGCAGCGC
ATCGACAATG AAGAAGAGCG CCACCGTTTA AAGACTGAGC TTGGCGCACT GATGCAAACG
GTCAATCTTA CCGGCGGGCT TATTGCTCGT ACCGCCGCAG AGCGGGTACC AGTGGCCAAG
CTAGAAGAGG ATATCTACTA TCTAGTACAG CTATGGCGCA CCATTCAAGC GCGTAAAGAA
GCCTCAGCGG GTAGTGGTCA AAGTGCGGTG CTGATTTATC AAGAATTGTC GCTTCCACTG
CGCTCTATCC GAGATTTGGT GCATCCAGAT ACCGAAAAAG TCATTGTCGA TCACGAAGGT
ATGTACAATG AGGTGCGTCA GTTTGCCAAA GAGTTTGTGC CTTTTATCTA TCCACGTATC
CTGCCTTACA GTGGCGAGCA GCCTTTATTT GATGTGCACC GGGTTGAAGA GGATTTGCGT
GATGCGTTAA AGCGCCGAGT AGACTTAAAA TCGGGCGGCT ACCTGATTAT CGATCAAACC
GAGGCAATGA CCACCATTGA TGTCAATACC GGCTCTTTTG TGGGTGGACG CTCGCTTGAG
GACACGGTAT ATAAAACTAA TTTGGAAGCC ACTCATGCTA TTGCCCGTCA GCTTAGACTG
CGTAATTTAG GCGGCATCAT CATCCTTGAT TTTATTGATA TGCTCGAGCA GCAGCACAAA
GATGATGTGT TAGAGAACTT ACAATATCAG CTGTCACAAG ACTATGCCAA AACCAAAATT
ACTCAGGTCA GTGAGCTTGG ACTGGTCGAG ATGACCCGCA AGCGCACACG TGAGTCATTA
GAGCAGCAGC TTTGTGAGCC ATGTAAGACG TGTGAGGGTA AGGGCTTTAT CAAGACAGCA
GAAACCGTTT GCTTTGAGAT TTTCCGTGAG ATCATGCGCT GTGCCCGAAC TTATAACTCA
CCTAAGAAGT TTACGGTGGT GGCGCACGCT TCGGTAATTG ACTTACTACT CTCATCTGAA
GCAGACACAG TCGCTGACTT AGAGTATCTT TTGGGCCGAG TTATCACGTT TGAGGTGGAG
AATTTATATA CCCAAGAGCA GTATGATATC GTCTTAGATT AG
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| Protein sequence | MSEELLINVS PMESRVAVLD NGVVSEVYIE RHNKLGLVGN IYLGTVVRVL PGMQAAFVEI
GQSRTAFLHV NDMRRIARPA PTADKAPEIR HNAKQEPTVL TSMPVDRCEH IAENVVTASD
TMASVIAETE PAMEADPLSA KTEIEAGSLR EKKSALADES DNLKNDLLDN ALLEIDSPDM
VGNAITKADT KPAAVKERQI IEPPRHELIQ YRLHEGQKIL VQVTKDQLGT KGARLTTNIS
LPSRYLVYLP SSEHIGISQR IDNEEERHRL KTELGALMQT VNLTGGLIAR TAAERVPVAK
LEEDIYYLVQ LWRTIQARKE ASAGSGQSAV LIYQELSLPL RSIRDLVHPD TEKVIVDHEG
MYNEVRQFAK EFVPFIYPRI LPYSGEQPLF DVHRVEEDLR DALKRRVDLK SGGYLIIDQT
EAMTTIDVNT GSFVGGRSLE DTVYKTNLEA THAIARQLRL RNLGGIIILD FIDMLEQQHK
DDVLENLQYQ LSQDYAKTKI TQVSELGLVE MTRKRTRESL EQQLCEPCKT CEGKGFIKTA
ETVCFEIFRE IMRCARTYNS PKKFTVVAHA SVIDLLLSSE ADTVADLEYL LGRVITFEVE
NLYTQEQYDI VLD
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