| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0382 |
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| Symbol | |
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| ID | 5204906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 457938 |
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| End bp | 458861 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640598596 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001279287 |
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| Protein GI | 148652194 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000947242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000817708 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGAAT TACCTGAAGT CGAAACCACT AAAACCAGCC TTAAGCCTTT GCTCAAGAAA
CAAGTGGCGC AGGTTGACGT GTATCAGCCC AAATTGCGCT GGCCGGTACC AGATGATATT
CATCGCTTAC AGGGCTATAC TTTGCAGCAG GTAGAGCGCC GTGCTAAGTA TTTAATTTTA
CAATTTCAAC GCCTCCCCTC TCAAAGTGGC GCTAAAACAG CTAATATGCC TGATACCAAG
TCGATAATCA TCCACCTAGG TATGTCAGGC AGTCTTCAAC AATTCCCAGT TGGCACGGAC
AAGCGCAAAC ACGATCATTT AATTATGCAA TATAAAGCGG ATGATACAAA GCCAGCCATA
CAGCTGCACT ATCATGACCC TCGCCGCTTT GGGGCAATTT TATGGTTCGA TGACTATGCC
GAAAAACTGT TTGATCATCT AGGTATAGAG CCCTTAGATG ACCAATTTTC AGGCGACTAC
CTGTTTGATA AGATTCATAG AGTCGCTGAG AATGCCATCC GCAGTTGTCA TAACAAACCG
CTGTTAAAGC CCATTAGTCG GCCTATCAAA GCGGTGATTA TGGATCAAGA AGTTGTGGTC
GGAGTCGGTA ATATTTATGC CACAGAGAGT TTGTTTTTAT CAGGCATCCA TCCTATCACC
CCTGCCGATC AGCTGAGTAA AGTGCAGTTA GCTGAACTGG TAAAATACAT CAAAGAGATT
TTAAAACGGT CAATCACTCA AGGTGGCTCA ACTTTAAAAG ACTTTACCGT AGCCAGTGGT
ACAACCGGAT ACTTTCAGCA AACACTGTTG GTCTATGGCA AATATAAATC ACCTTGCCCG
ACTTGTGGTG CTGGTATTGA TAAGGTAGTA ATAACAGGCC GCGCCAGTAC CTTTTGTCCC
ACTTGTCAGC CTGAGCCATC TTAA
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| Protein sequence | MPELPEVETT KTSLKPLLKK QVAQVDVYQP KLRWPVPDDI HRLQGYTLQQ VERRAKYLIL
QFQRLPSQSG AKTANMPDTK SIIIHLGMSG SLQQFPVGTD KRKHDHLIMQ YKADDTKPAI
QLHYHDPRRF GAILWFDDYA EKLFDHLGIE PLDDQFSGDY LFDKIHRVAE NAIRSCHNKP
LLKPISRPIK AVIMDQEVVV GVGNIYATES LFLSGIHPIT PADQLSKVQL AELVKYIKEI
LKRSITQGGS TLKDFTVASG TTGYFQQTLL VYGKYKSPCP TCGAGIDKVV ITGRASTFCP
TCQPEPS
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