Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0369 |
Symbol | nhaA |
ID | 5205354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 442104 |
End bp | 443303 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598581 |
Product | pH-dependent sodium/proton antiporter |
Protein accession | YP_001279274 |
Protein GI | 148652181 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0301682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000785162 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTACCAGA AACTAAAAAA ATTCTTTGAG TATGAGGCGG CAGGAGGCAT TGTGCTGGCA CTGGCAGCCA TCGCAGCCAT GATCGTTGCC AACTCTCCCT TACATGATTG GTATGAGTCT TTTATTCACG CCCCTGTGGT GGTTCAGGTG GGCGAGCTAA TTATCAGCAA AGATGCGCAT CATTGGATTA ATGATGGTTT GATGGCGGTG TTCTTCTTCT TAGTCGGCTT AGAGCTTAAG CGCGAGGTAT TGATTGGTGA ATTATCTAAT ATCAATCAAA TTGTCCTGCC GGCGGCGGCG GCCGTCGGGG GCATGATAGC GCCAGCTTTG GTCTACGTCG CTTTTAATGC CAGCCACCCC GAGTACTTGG CAGGCTGGGC AATTCCTGCT GCCACAGACA TCGCTTTTGC CATTGGTATC TTAAGTTTGC TTGGTAGCCG TGTACCGAAC TCGTTAAAGA TATTTTTAGT GTCAATTGCC ATCTTTGATG ACATTGGCGC CATTTTAATT ATCGCTTTGT TTTATACCAG TGACTTGTCG TTGTTATCTT TATTGATAGC AGGATTGTGC TTGCCGTTTT TATACCTGCT CAATCGCCGT AATGTCACGG CAATTACCCC CTATTTATTT TTTGGGATTA TCATGTGGAT TGCGGTATTA AAATCCGGTA TTCATGCCAC TTTGGCGGGG GTTATCCTAG CACTATTTAT CCCTATGGTG AATACAGATG ACCCTGAGCA CTCGCCCCTT GAAGACTTAG AGCACGACCT ACATGGCACG GTAGCCTTTG CGATTTTACC GCTATTTGCC TTTGCAAACG CTGGTATCTC ATTGCAAGGT GCTGGATTTG GTCAGCTGTT ACACTCAGTG CCCTTTGGTA TTGCGGCCGG TTTATTTATC GGTAAACAGG TGGGTATTAT GCTGATGACT TGGAGCATTA TTAAAGCAGG CCTAGCCTCA TTGCCTAATG GCACCAACTT TAAGCAAATC TATGGTGTTT CTTTGCTGTG CGGTGTGGGC TTTACCATGA GCTTGTTTAT CAGTGGCCTA GCCTTTGGCG GCGTTACCGA AGGTTTCGAT CCGCGCTTGG GTATTATCCT AGGCTCTATC ATCTCAGGCA TTGCCGGCTA CATGCTGCTA AAGCGTACTT TAAAAGAAGA CACTGCCACT GGCATCACTG CACTGGATTT AACTCGATAG
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Protein sequence | MYQKLKKFFE YEAAGGIVLA LAAIAAMIVA NSPLHDWYES FIHAPVVVQV GELIISKDAH HWINDGLMAV FFFLVGLELK REVLIGELSN INQIVLPAAA AVGGMIAPAL VYVAFNASHP EYLAGWAIPA ATDIAFAIGI LSLLGSRVPN SLKIFLVSIA IFDDIGAILI IALFYTSDLS LLSLLIAGLC LPFLYLLNRR NVTAITPYLF FGIIMWIAVL KSGIHATLAG VILALFIPMV NTDDPEHSPL EDLEHDLHGT VAFAILPLFA FANAGISLQG AGFGQLLHSV PFGIAAGLFI GKQVGIMLMT WSIIKAGLAS LPNGTNFKQI YGVSLLCGVG FTMSLFISGL AFGGVTEGFD PRLGIILGSI ISGIAGYMLL KRTLKEDTAT GITALDLTR
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