| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0314 |
|---|
| Symbol | |
|---|
| ID | 5204888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 375637 |
|---|
| End bp | 376707 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640598524 |
|---|
| Product | beta-hexosaminidase |
|---|
| Protein accession | YP_001279219 |
|---|
| Protein GI | 148652126 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000877507 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00197182 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTATGGGC CATTAATGAT AGATGTGGCA GGCACCGAAC TGACTGCCGA AGATCGCGAC
GTCCTAAGCT GTGAGCAGGT GGGGGGTGTT ATTTTATTTG CCCGTAATGT CGAGACCCCC
GAGCAAGTAC GACGGTTATG TGATGAGATT CATCAACAGC AGCCCGATAT CATCATCGGT
GTCGATCAAG AAGGCGGACG GGTGGCAAGA CTGCGTCAAG GCTTTACCCC GCTACCAGCA
ATGGGAAAAC TGGGTGATTT ATTTGATTCA GACCCTTGTG GGGCGCTTAG CTTGGCTTAC
GACTGCGGCT ATCTTATGGC CGCAGAGGTC ATGGCGGTGG GCATTGACAT AAGCTTTGCG
CCCGTGCTTG ATATCAATGG GGTCAGTCAA GTTATCGGCG ATCGCAGCTT TCATGCGCGC
ACCGAAGCCA TCGTGGCGCT TTCTTCTCAG TTTATGCGAG GTATGAAAGC TGCAGGCATG
GCAACCACAG GCAAGCACTT TCCAGGTCAT GGTTCCATTG CCCCTGATTC ACATGTGGCA
GATGTCATTG ACAATCGCAG CTTTGAGCAG ATTAAAGCGG TAGACCTGCA GCCCTTTATT
CAGTGTCAGC CTTGGCTTGA TGCCCTTATG CCCGCCCATG TTATCTTCTC TCAAGTAGAT
GATAAGCCGG CAGGATTCTC CAAAGTATGG CTACAAGACA TTGCCCGAGA GCAATTGGGC
TTCAATGGGG TGTTATTCTC AGATGACTTA TCTATGAAAG CGGCACACGT GGCCGGTGAT
GTCAGTGCTC GAGTTACCGC AGCTTTAGAA GCTGGCTGCG ACATGGCCTT AGTGTGTAAT
GATAGAGAGG CAGCGCTGCA AGCCATACAG ACCTCAGCCC AGTTGCCCAA GCCCAATCAA
ACCCGGCTTG AAGCGATGCG TAGTCAGCTG CCTACTTGGC AAGGCTCACT AGAGGCCACT
TGCGCCCAAT TTGATTATTG GGCAGTGGCG AAACAAAATA TTACGCAGGC TTTTTTTAAC
GAACCATTAG TGGCTGCGCA AGCAACCGAT CCCACTGATT ATAAGCGCTA A
|
|---|
| Protein sequence | MYGPLMIDVA GTELTAEDRD VLSCEQVGGV ILFARNVETP EQVRRLCDEI HQQQPDIIIG
VDQEGGRVAR LRQGFTPLPA MGKLGDLFDS DPCGALSLAY DCGYLMAAEV MAVGIDISFA
PVLDINGVSQ VIGDRSFHAR TEAIVALSSQ FMRGMKAAGM ATTGKHFPGH GSIAPDSHVA
DVIDNRSFEQ IKAVDLQPFI QCQPWLDALM PAHVIFSQVD DKPAGFSKVW LQDIAREQLG
FNGVLFSDDL SMKAAHVAGD VSARVTAALE AGCDMALVCN DREAALQAIQ TSAQLPKPNQ
TRLEAMRSQL PTWQGSLEAT CAQFDYWAVA KQNITQAFFN EPLVAAQATD PTDYKR
|
|---|
| |