Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0214 |
Symbol | |
ID | 5205477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 252948 |
End bp | 255470 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640598428 |
Product | trimethylamine-N-oxide reductase TorA |
Protein accession | YP_001279123 |
Protein GI | 148652030 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TCAATCGCAG GGGCTTTTTA AAATCGCTGG CGGCTTTGTC GGGTACGGCG CTACTCCCTA CGCCGCTGTT GGCCGATGAC AGCGTATTGA CCTCAGCCAC AGGCGACAAA CCGCAAGACT TTAGTGGCTG GAAAATGTCC GGCGCACACT GGGGTGCTTT TCGTGCTCGA GTTGAGGCGG ACAAGCTGGT GGAAATCAAA CCGTTTGAGT TTGATCAATA TCCCACTAAG ATTTTAGATG GCGTACCGGG CATTATCTAC AGCCCTTCAC GGGTACGCTA TCCGATGATT CGCGTCGACT GGTACAAAAA CCGTCAAAAC AGCGACACCT CACAGCGCGG CGACAACCGC TTTGTGCGTG TTAGCTGGGA TGAGGCGTTA GACATCTTGT ATCAAGAGCT TGAGCGCATT CAAAAAGACT ACGGGCCTTG GGCACTACAC ACCGCGAACG TGGGCTGGCG CTCGGTAGGT AACGTGCACA GCTGTGGTAA CCACATGCTG CGTGCCATTG CCATGCACGG CCACAGTGTA GGGACAGCAG GGGATTACTC AACTGGTGCC GGTCAGATGA TTTTGCCATA TATCTTGGGC TCCACTGAGG TGTATTCGCA AGGGACGTCT TGGCCACTGA TTTTAGAAAA TGCCAAAGTG ATTATCTTCT GGGCCAACGA CCCGATCAAA AACTTACAGG TCGGCTGGAA CACTGAGACC CACGAAGCTT ATGAATACTA CGAGATCTTG CGTGACAAGG TTCGCAACAA AGAGATCGAA GTGATCTGTA TCGATCCGGT GAAGAGCAAG ACGCAAAACT ACCTAGAGTG TGAGCATCAA TTCGTCAATC CTATGACAGA CGTGGCATTT ATGCTGGGTC TGGCGCACAC GTTATACACC GAGAAGCTGT ATGACAAAAA GTTCATCGAC ATGTATGCGT TGGGGTTAGA GGAATTCACC CCTTACTTGA TGGGTAAGAC CGAAGACAAG GTGGAGAAGA CCCCTGAGTG GGCTGAGAAA ATCTGCGGCG TAAAAGCCGA TAGAATTCGC GAATTGGCAC GTAAAATGGC CAAAAACCGT ACTCAGCTTT GCTTTGGCTG GGCCATTCAG CGTCAGCAGC ACGGTGAGCA GCCGTATTGG ATGGGGGCGA TTATCGCAGC GATGCTGGGT CAAATAGGTC TGCCAGGTGG CGGTATCAGT TATTCACACC ACTACAGCTC TGTGGGTGTG CCGACCTCTG GCGCCTCTAT GCCAGGCGCG TTCCCACTAA ACTTAGACAC TGGCCGTAAG CCTAAATATG ACAATAACAA TTACAATGGC TACAGCTCTG TCATTCCGGT TGCGCGTATG GTGGATTGTC TGCTTGAGCC TGGTAAGAAG ATTAACTTTA ATGGCCATGA AGTGACCCTA CCACCGCTGA AAATGGGGAT CTTTACGGGC AGTAACCAGT GGCACCGTCA CCAAGATCGC AACCGCATGA AAAAAGGCTA TCGCAATATG GAGACCGTGG TATCCGTTGA TTATAACTGG ACCGCCACCT GCCGTTTCGC TGATATCGTA TTGCCGGCCT GTACCCCTTA TGAGCGTAAC GACATTGACG CTTATGGCTC GTACAGTAAC CGAGGCGTGA TTGCGATGCA CAAGCTGGTA GACCCCTTGT ACCACTCTAA GTCTGACTTT GAAATCTGGT ATGAGTTCAC CAAGCGTATG GGCCGTGAGC TTGAGTATAG CCGGGCGATG AATGAGATAC AGTGGATTGA GCAGATTTAT GAGGACTGCC GTGCTGAGAA CCTAAAAAAA GACTTCTTTA TGCCGGAGTT CAAAGAGTTC TGGGAAAAAG GCTATGTGTT ATTCCCAGAA GGGGAGAACT GGGTACGTCA CGCAGACTTC CGTGAAGACC CTGAAGTCAA CGCACTGGGC ACGCCATCAG GCTTTATCGA GATCAGCAGC CGCAAGATTG CCAGCTACGG TTATGCAGAC TGTAAAGGTC ATCCTATTTG GATGGAAAAA GCCGAGCGCT CACACGGTGG CCCAGGCTCA GATAAGTATC CGTTATGGCT ACAATCGGTG CACCCAGACA CCCGCTTGCA CTCACAGACC TGTGAGTCTG AGGAGCGCCG TGTTACGTAT ACCGTTCAAG ACCGTGAACC TTGCTATATC GGCCCTGAAG ATGCCAGAGC ACGAGGGATT AGCGATGGTG ACTTAGTCCG TGTGTTTAAT GACCGAGGGC AGCTGCTTGC AGGCGCCGTC ATCTCTGATA ACTTCCCACC TGGCGTCATT CGTATTCAAG AAGGCGCTTG GTATGGCCCG ACCGGCCCTG AAATTGGCGC CCTGGATACC TATGGAGATC CCAATACCTT GACCTTAGAT ATCGGGACTT CGATGTTGGC GCAGGGCCCA AGTGCCAATA CCTGCTTGGT TGAGATTGAA AAATTCGTCG GCAAAGCGCC AGCGGTGACC TCCTTTGGTG GTCCCACTTA TGTCAATCCA GACGGCACGC CAGCGGCAGA AGACAAAGGC TAG
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Protein sequence | MKNINRRGFL KSLAALSGTA LLPTPLLADD SVLTSATGDK PQDFSGWKMS GAHWGAFRAR VEADKLVEIK PFEFDQYPTK ILDGVPGIIY SPSRVRYPMI RVDWYKNRQN SDTSQRGDNR FVRVSWDEAL DILYQELERI QKDYGPWALH TANVGWRSVG NVHSCGNHML RAIAMHGHSV GTAGDYSTGA GQMILPYILG STEVYSQGTS WPLILENAKV IIFWANDPIK NLQVGWNTET HEAYEYYEIL RDKVRNKEIE VICIDPVKSK TQNYLECEHQ FVNPMTDVAF MLGLAHTLYT EKLYDKKFID MYALGLEEFT PYLMGKTEDK VEKTPEWAEK ICGVKADRIR ELARKMAKNR TQLCFGWAIQ RQQHGEQPYW MGAIIAAMLG QIGLPGGGIS YSHHYSSVGV PTSGASMPGA FPLNLDTGRK PKYDNNNYNG YSSVIPVARM VDCLLEPGKK INFNGHEVTL PPLKMGIFTG SNQWHRHQDR NRMKKGYRNM ETVVSVDYNW TATCRFADIV LPACTPYERN DIDAYGSYSN RGVIAMHKLV DPLYHSKSDF EIWYEFTKRM GRELEYSRAM NEIQWIEQIY EDCRAENLKK DFFMPEFKEF WEKGYVLFPE GENWVRHADF REDPEVNALG TPSGFIEISS RKIASYGYAD CKGHPIWMEK AERSHGGPGS DKYPLWLQSV HPDTRLHSQT CESEERRVTY TVQDREPCYI GPEDARARGI SDGDLVRVFN DRGQLLAGAV ISDNFPPGVI RIQEGAWYGP TGPEIGALDT YGDPNTLTLD IGTSMLAQGP SANTCLVEIE KFVGKAPAVT SFGGPTYVNP DGTPAAEDKG
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